RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SPATA21Q7Z572 469 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 HDAC11Q96DB2 347 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 KPNA6O60684 536 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 ARFIP2P53365 341 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 TMEM259Q4ZIN3 620 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 CYB5D1Q6P9G0 228 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 USP17L6PQ6QN14 398 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 C4orf50Q6ZRC1 276 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 C16orf86Q6ZW13 317 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 TMEM35BQ8NCS4 154 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 SNX24Q9Y343 169 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 E7ENQ6 273 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 SGK1O00141 431 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 DGAT1O75907 488 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 KPNA2P52292 529 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 SNAP25P60880 206 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RABGAP1LQ5R372 815 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 FGGP02679 453 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 DDIT3P35638 169 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RFC5P40937 340 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RAD51Q06609 339 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 BYSLQ13895 437 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 KAZNQ674X7 775 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RFX6Q8HWS3 928 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 RHPN2Q8IUC4 686 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 PCSK9Q8NBP7 692 aaKnown RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 IFT172Q9UG01 1749 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 GGPS1O95749 300 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 FAM107AO95990 144 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 TFRCP02786 760 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 PMS2P54278 862 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 ENOSF1Q7L5Y1 443 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SRRM1Q8IYB3 904 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SEC16BQ96JE7 1060 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SMYD3Q9H7B4 428 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 PLS3P13797 630 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 CENPUQ71F23 418 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZC3H15Q8WU90 426 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 ACAP3Q96P50 834 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 PAPOLBQ9NRJ5 636 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SLC38A7Q9NVC3 462 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 CLIC2O15247 247 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SUPT3HO75486 399 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SRGNP10124 158 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 PAPOLAP51003 745 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 BAATQ14032 418 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SNRNP27Q8WVK2 155 aaKnown RBP12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 TMEM131LA2VDJ0 1609 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
PCDHGA6-201ENST00000517434 GAS2O43903 313 aaKnown RBP12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 COBLO75128 1261 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 NR3C2P08235 984 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 INHBEP58166 350 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 ERICH1Q86X53 443 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 HPCAL4Q9UM19 191 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 ATP11BQ9Y2G3 1177 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 NEDD4P46934 1319 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 HOXA2O43364 376 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 PDE5AO76074 875 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 ACADSP16219 412 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 CCZ1BP86790 482 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 CCZ1P86791 482 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 DGKDQ16760 1214 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 INTS5Q6P9B9 1019 aaKnown RBP12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 USP15Q9Y4E8 981 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 CCT8L1PA6NM43 557 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 SYCE1LA8MT33 242 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 SERPINB10P48595 397 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 CAV1Q03135 178 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 PDIK1LQ8N165 341 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 LZICQ8WZA0 190 aa12.97□□□□□ -0.33
PCDHGA6-201ENST00000517434 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms