RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 USHBP1Q8N6Y0 703 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 DTWD2Q8NBA8 298 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 KLHL23Q8NBE8 558 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 C3orf20Q8ND61 904 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TOR1AIP2Q8NFQ8 470 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 KCNG4Q8TDN1 519 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TNFRSF25Q93038 417 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 IWS1Q96ST2 819 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 GPATCH1Q9BRR8 931 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ABCG4Q9H172 646 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CYP4F12Q9HCS2 524 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 PRDM5Q9NQX1 630 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 EIF2B3Q9NR50 452 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TMEM160Q9NX00 188 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHA6Q9UN73 950 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 PHF24Q9UPV7 400 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF711Q9Y462 761 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 WTIPA6NIX2 430 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 THAP12O43422 761 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 B3GALNT1O75752 331 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM155BO75949 473 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SGPL1O95470 568 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 NDST3O95803 873 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 HNRNPA1P09651 372 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 NPR1P16066 1061 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 STMN1P16949 149 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 WASP42768 502 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 AARSP49588 968 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MRE11P49959 708 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCR9P51686 369 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 AFF3P51826 1226 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 HTRA4P83105 476 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MALLQ13021 153 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 NMIQ13287 307 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 EFR3AQ14156 821 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 NR0B2Q15466 257 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 GRIK5Q16478 980 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZBTB41Q5SVQ8 909 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 EEF1DP3Q658K8 133 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MBLAC2Q68D91 279 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 ISM2Q6H9L7 571 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 RCSD1Q6JBY9 416 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC22A25Q6T423 547 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 KLHL17Q6TDP4 642 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 HEATR3Q7Z4Q2 680 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 R3HCC1LQ7Z5L2 792 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 TTC30AQ86WT1 665 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 PHYKPLQ8IUZ5 450 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 FANCBQ8NB91 859 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SH3RF2Q8TEC5 729 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 DPF3Q92784 378 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 N4BP2L2Q92802 583 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 NSUN4Q96CB9 384 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM163AQ96GL9 167 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SUCLG2Q96I99 432 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MSLNLQ96KJ4 702 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 PDCD2LQ9BRP1 358 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 MYL10Q9BUA6 226 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADI1Q9BV57 179 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC12A9Q9BXP2 914 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 GPR63Q9BZJ6 419 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 TSPY26PQ9H489 355 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 TAF1DQ9H5J8 278 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 XAB2Q9HCS7 855 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SEPSECSQ9HD40 501 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SERHLQ9NQF3 203 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCDC177Q9NQR7 707 aaPredicted RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 CNNM1Q9NRU3 951 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 KCNH7Q9NS40 1196 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 PNPOQ9NVS9 261 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 STK32BQ9NY57 414 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 WDR35Q9P2L0 1181 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 AFF4Q9UHB7 1163 aaKnown RBP4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCOLCE2Q9UKZ9 415 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 RABL2BQ9UNT1 228 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
RNU4-60P-201ENST00000517239 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 FYB1O15117 783 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 MTSS1O43312 755 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADAM11O75078 769 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CLASP2O75122 1294 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 PRPF6O94906 941 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 KRT1P04264 644 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 BCRP11274 1271 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 VAV1P15498 845 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 DESP17661 470 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 ASPAP45381 313 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 HSD17B7P56937 341 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 PSMC1P62191 440 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 RPS16P62249 146 aaKnown RBP4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 CHRNDQ07001 517 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 LRMPQ12912 555 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 LAPTM5Q13571 262 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 SPIDRQ14159 915 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 UBE3CQ15386 1083 aa4.41□□□□□ -1.7
RNU4-60P-201ENST00000517239 GLIPR1L2Q4G1C9 344 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms