RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADGRE2Q9UHX3 823 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRSS50Q9UI38 385 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FEM1BQ9UK73 627 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 ACAD8Q9UKU7 415 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 RWDD3Q9Y3V2 267 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCDHB1Q9Y5F3 818 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CDY2AQ9Y6F7 541 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CNTNAP4Q9C0A0 1308 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CCDC196A0A1B0GTZ2 297 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 PI4KAP2A4QPH2 592 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MYO1FO00160 1098 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 FCHO1O14526 889 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TM4SF5O14894 197 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 USO1O60763 962 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 NDST3O95803 873 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 EOMESO95936 686 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ANXA2P07355 339 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ITGA2BP08514 1039 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TGFB3P10600 412 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RARBP10826 455 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TYRP14679 529 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ENDOUP21128 410 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CTSSP25774 331 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 LTKP29376 864 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 STAT5AP42229 794 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MCAMP43121 646 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 PER3P56645 1201 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RAC1P63000 192 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 NKX6-1P78426 367 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ROM1Q03395 351 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 GRIN1Q05586 938 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CUL4BQ13620 913 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RAB30Q15771 203 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TSTQ16762 297 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TBC1D10BQ4KMP7 808 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC44A4Q53GD3 710 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CDKAL1Q5VV42 579 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 STEAP3Q658P3 488 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ANKRD34AQ69YU3 496 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 KIAA1841Q6NSI8 718 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CYP4F22Q6NT55 531 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC30A6Q6NXT4 461 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 BTNL9Q6UXG8 535 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 UNQ6494/PRO21346Q6UXR6 183 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARHGAP27Q6ZUM4 889 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 B4GALNT4Q76KP1 1039 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 GATAD2AQ86YP4 633 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RIOX2Q8IUF8 465 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 PLD6Q8N2A8 252 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 AGGF1Q8N302 714 aaeCLIP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MPP5Q8N3R9 675 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CELF5Q8N6W0 485 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 NKAIN3Q8N8D7 197 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 LINC00116Q8NCU8 138 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MSANTD4Q8NCY6 345 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 NLGN2Q8NFZ4 835 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 OR6B3Q8NGW1 331 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 GAB3Q8WWW8 586 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RSAD2Q8WXG1 361 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ST8SIA4Q92187 359 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ATP2A3Q93084 1043 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TBC1D31Q96DN5 1066 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ASIC4Q96FT7 647 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TMX3Q96JJ7 454 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 CNDP2Q96KP4 475 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 SNX22Q96L94 193 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 C7orf26Q96N11 449 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MYCBPQ99417 103 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 P2RX7Q99572 595 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TREX2Q9BQ50 279 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 EIF2AQ9BY44 585 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MAGEB5Q9BZ81 275 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 PDCL3Q9H2J4 239 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 SEMA6CQ9H3T2 930 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 GSX1Q9H4S2 264 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ACSS3Q9H6R3 686 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ELAC1Q9H777 363 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 ATP13A2Q9NQ11 1180 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 EIF2B3Q9NR50 452 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TM7SF3Q9NS93 570 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 TBC1D29Q9UFV1 150 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 SYNPO2Q9UMS6 1093 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 RRP7AQ9Y3A4 280 aaKnown RBP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 MYPNQ86TC9 1320 aa4.11□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PQJ5 194 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM90A27PA6NNH2 459 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM171A2A8MVW0 826 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 DYNC1LI2O43237 492 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 ASNA1O43681 348 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 LEFTY1O75610 366 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 KRT38O76015 456 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 USP1O94782 785 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARIH2O95376 493 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 TIAF1O95411 115 aa4.1□□□□□ -1.75
HMGB1P22-201ENST00000505315 PAPLNO95428 1278 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms