RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RMDN3Q96TC7 470 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 CGRRF1Q99675 332 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 KCNJ15Q99712 375 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SSBP4Q9BWG4 385 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 ZDHHC5Q9C0B5 715 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 MAGEH1Q9H213 219 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 PCIF1Q9H4Z3 704 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 STARD7Q9NQZ5 370 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 TMEFF2Q9UIK5 374 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SNX5Q9Y5X3 404 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 NPFFR2Q9Y5X5 522 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 GPR45Q9Y5Y3 372 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 XIRP1Q702N8 1843 aaKnown RBP4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 SETBP1Q9Y6X0 1596 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 USP19O94966 1318 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 NRXN1Q9ULB1 1477 aa4.94□□□□□ -1.62
HMGB1P21-201ENST00000502313 PABPN1LA6NDY0 278 aaKnown RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 H7C1D1 291 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 RBAK-RBAKDNI3L0D1 243 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 SETD1AO15047 1707 aaKnown RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 FFAR2O15552 330 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PAPLNO95428 1278 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 MYF5P13349 255 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 LCP1P13796 627 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 AKR1B1P15121 316 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 FSTP19883 344 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 LIFRP42702 1097 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 MTNR1BP49286 362 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 SPIRE1Q08AE8 756 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PPP2R5CQ13362 524 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 IKZF1Q13422 519 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 TESK1Q15569 626 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 NKPD1Q17RQ9 610 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 SPHKAPQ2M3C7 1700 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 FAM205BPQ63HN1 556 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 JMJD6Q6NYC1 403 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 CASC1Q6TDU7 716 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 NEK10Q6ZWH5 1172 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 FAM214BQ7L5A3 538 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 SIRT2Q8IXJ6 389 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 NRSN1Q8IZ57 195 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 RCBTB1Q8NDN9 531 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PTPRUQ92729 1446 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 DCAF5Q96JK2 942 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 ORAI2Q96SN7 254 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 ELF4Q99607 663 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PDGFDQ9GZP0 370 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 QRSL1Q9H0R6 528 aaKnown RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 ELAC1Q9H777 363 aaKnown RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 IPPKQ9H8X2 491 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 DCP1AQ9NPI6 582 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 WASH6PQ9NQA3 447 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 ZNF277Q9NRM2 450 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 IRAK4Q9NWZ3 460 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PIM2Q9P1W9 311 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 LRFN1Q9P244 771 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 NFKBIL1Q9UBC1 381 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PPARGC1AQ9UBK2 798 aaKnown RBP4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 AASSQ9UDR5 926 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 EDARQ9UNE0 448 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 GPR34Q9UPC5 381 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 RIMS2Q9UQ26 1411 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 TMEM98Q9Y2Y6 226 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 SNX11Q9Y5W9 270 aa4.93□□□□□ -1.62
HMGB1P21-201ENST00000502313 PIK3R4Q99570 1358 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 ANKRD30BQ9BXX2 1392 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 SETD5Q9C0A6 1442 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 NCOA3Q9Y6Q9 1424 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 DVL2O14641 736 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 P4HA2O15460 535 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 FRS3O43559 492 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 DGKIO75912 1065 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 FGF18O76093 207 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 DNTTP04053 509 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 HARSP12081 509 aaKnown RBP4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 KRT15P19012 456 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 HSPA7P48741 367 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 ITGA8P53708 1063 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 NR1H2P55055 460 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 SNX16P57768 344 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 PHC1P78364 1004 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 PMS2P11Q13670 270 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 PFKFB4Q16877 469 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 MPEG1Q2M385 716 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CT83Q5H943 113 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 SLC10A5Q5PT55 438 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CFAP58Q5T655 872 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 KLHDC7AQ5VTJ3 777 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CCDC129Q6ZRS4 1044 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 RFX8Q6ZV50 586 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 MAEAQ7L5Y9 396 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CABP7Q86V35 215 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 CCDC103Q8IW40 242 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 TEX11Q8IYF3 940 aa4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 PLD6Q8N2A8 252 aaKnown RBP4.92□□□□□ -1.62
HMGB1P21-201ENST00000502313 USHBP1Q8N6Y0 703 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms