RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	YWHAB	P31946	246 aa	Known RBP	18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	SSRP1	Q08945	709 aa	Known RBP	18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	GRIK3	Q13003	919 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	XKR9	Q5GH70	373 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	ZNF852	Q6ZMS4	543 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CPB2	Q96IY4	423 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	JAKMIP1	Q96N16	626 aa	Known RBP	18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	MTR	Q99707	1265 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PHF20	Q9BVI0	1012 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	LTB4R2	Q9NPC1	389 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	RAB23	Q9ULC3	237 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	KCNH3	Q9ULD8	1083 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	USP18	Q9UMW8	372 aa		18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	MTF2	Q9Y483	593 aa	Predicted RBP	18.43	■□□□□ 0.54
SUPT20H-223	ENST00000497318	ZMYM2	Q9UBW7	1377 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	C8A	P07357	584 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CPA1	P15085	419 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	RPS9	P46781	194 aa	Known RBP	18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	EPHA7	Q15375	998 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	BMP2KL	Q5H9B9	411 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	KRT25	Q7Z3Z0	450 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CLDN23	Q96B33	292 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	LXN	Q9BS40	222 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	ZSWIM4	Q9H7M6	989 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PARP2	Q9UGN5	583 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	VAV3	Q9UKW4	847 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	DOCK8	Q8NF50	2099 aa		18.42	■□□□□ 0.54
SUPT20H-223	ENST00000497318	LILRB5	O75023	590 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	AKAP5	P24588	427 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	NRL	P54845	237 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	NTHL1	P78549	312 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	ELAVL2	Q12926	359 aa	Known RBP	18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PPP2R5D	Q14738	602 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	UVSSA	Q2YD98	709 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	SLC27A1	Q6PCB7	646 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	RTL10	Q7L3V2	364 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CEP57	Q86XR8	500 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	DAGLB	Q8NCG7	672 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PIK3R5	Q8WYR1	880 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	KXD1	Q9BQD3	176 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CLSTN3	Q9BQT9	956 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	NXF3	Q9H4D5	531 aa	Known RBP	18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	WDR81	Q562E7	1941 aa		18.41	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CPLX1	O14810	134 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CCL16	O15467	120 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	POU2F2	P09086	479 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	GCFC2	P16383	781 aa	Known RBP	18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	ARF4	P18085	180 aa	Predicted RBP	18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CD72	P21854	359 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	CCT2	P78371	535 aa	Known RBP	18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	TUSC3	Q13454	348 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	PSMD5	Q16401	504 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	INF2	Q27J81	1249 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	RTP2	Q5QGT7	225 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	FAM171A1	Q5VUB5	890 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	TPRG1	Q6ZUI0	275 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	GSTCD	Q8NEC7	633 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	RABGGTA	Q92696	567 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	NELL1	Q92832	810 aa		18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	NAP1L4	Q99733	375 aa	Known RBP	18.4	■□□□□ 0.54
SUPT20H-223	ENST00000497318	FANCM	Q8IYD8	2048 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	CCDC194	A0A1B0GVG4	234 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	DCDC2B	A2VCK2	349 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	TBX3	O15119	743 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	SLC37A4	O43826	429 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	ECI2	O75521	394 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	DEXI	O95424	95 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	NPTXR	O95502	500 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	PSMA5	P28066	241 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	PDIA3	P30101	505 aa	Known RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	MBTD1	Q05BQ5	628 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	ADCY1	Q08828	1119 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	ST3GAL2	Q16842	350 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	PABPC1L	Q4VXU2	614 aa	Known RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	PPP4R3A	Q6IN85	833 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	CPLX2	Q6PUV4	134 aa	Known RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	ITFG1	Q8TB96	612 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	LNX1	Q8TBB1	728 aa	Predicted RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	NFKBIZ	Q9BYH8	718 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	NCOA5	Q9HCD5	579 aa	Known RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	KCNMB3	Q9NPA1	279 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	GDE1	Q9NZC3	331 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	KLK14	Q9P0G3	267 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318	CHD8	Q9HCK8	2581 aa		18.39	■□□□□ 0.53
SUPT20H-223	ENST00000497318		A0A1B0GUA9	196 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318		M0R2N6	131 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	BAG4	O95429	457 aa	Known RBP	18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	RPS6KB1	P23443	525 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	AXDND1	Q5T1B0	1012 aa	Predicted RBP	18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	TPH2	Q8IWU9	490 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	SLC7A14	Q8TBB6	771 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	KCNB2	Q92953	911 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	CCDC43	Q96MW1	224 aa	Known RBP	18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	AGXT2	Q9BYV1	514 aa		18.38	■□□□□ 0.53
SUPT20H-223	ENST00000497318	PRMT8	Q9NR22	394 aa	Predicted RBP	18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms