RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 PLEKHO2Q8TD55 490 aa18.38■□□□□ 0.53
NF1-211ENST00000487476 NXF3Q9H4D5 531 aaKnown RBP18.38■□□□□ 0.53
NF1-211ENST00000487476 MEFVO15553 781 aaPredicted RBP18.37■□□□□ 0.53
NF1-211ENST00000487476 FGFR1OPO95684 399 aaKnown RBP18.37■□□□□ 0.53
NF1-211ENST00000487476 MCF2P10911 925 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
NF1-211ENST00000487476 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 KRT31Q15323 416 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 CCDC40Q4G0X9 1142 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 PLEKHG4Q58EX7 1191 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 ADAM2Q99965 735 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 ADPGKQ9BRR6 497 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 EPB41P11171 864 aaKnown RBP18.37■□□□□ 0.53
NF1-211ENST00000487476 RAG1P15918 1043 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 APTXQ7Z2E3 356 aaKnown RBP18.37■□□□□ 0.53
NF1-211ENST00000487476 LINC01599Q8WXQ3 324 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 FAM84AQ96KN4 292 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 RNF39Q9H2S5 420 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 CHST12Q9NRB3 414 aa18.37■□□□□ 0.53
NF1-211ENST00000487476 SLC16A3O15427 465 aaKnown RBP18.36■□□□□ 0.53
NF1-211ENST00000487476 STAG3L1P0CL83 205 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 CSF2RAP15509 400 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 ZSCAN20P17040 1043 aaPredicted RBP18.36■□□□□ 0.53
NF1-211ENST00000487476 TPM4P67936 248 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 DLG4P78352 724 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 SMG8Q8ND04 991 aaKnown RBP18.36■□□□□ 0.53
NF1-211ENST00000487476 CXCL16Q9H2A7 254 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 TAB2Q9NYJ8 693 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 MAGEC2Q9UBF1 373 aaPredicted RBP18.36■□□□□ 0.53
NF1-211ENST00000487476 CPSF3Q9UKF6 684 aaKnown RBP18.36■□□□□ 0.53
NF1-211ENST00000487476 SCN5AQ14524 2016 aa18.36■□□□□ 0.53
NF1-211ENST00000487476 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 CXCL10P02778 98 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 AKAP5P24588 427 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 DNTTIP2Q5QJE6 756 aaKnown RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 POP1Q99575 1024 aaKnown RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 TRIM6Q9C030 488 aaPredicted RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 RNF19AQ9NV58 838 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 ARMCX3Q9UH62 379 aaPredicted RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 TET1Q8NFU7 2136 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 ZNF233A6NK53 670 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 MEIS3P2A8K0S8 358 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 FANCCQ00597 558 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 CYP24A1Q07973 514 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 DCAF4L1Q3SXM0 396 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 FRMD5Q7Z6J6 570 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 C17orf53Q8N3J3 647 aaPredicted RBP18.35■□□□□ 0.53
NF1-211ENST00000487476 CCDC127Q96BQ5 260 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 MFSD14AQ96MC6 490 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 TUBGCP2Q9BSJ2 902 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 MKNK1Q9BUB5 465 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 VPS16Q9H269 839 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 IPPQ9Y573 584 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 PCDHB2Q9Y5E7 798 aa18.35■□□□□ 0.53
NF1-211ENST00000487476 KIAA0391O15091 583 aaKnown RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 GNA14O95837 355 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 LDHAP00338 332 aaKnown RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 CXCL8P10145 99 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 SYN1P17600 705 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 MARSP56192 900 aaKnown RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 PTPN21Q16825 1174 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 FAM114A1Q8IWE2 563 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 TRIM59Q8IWR1 403 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 FAM212AQ96EL1 285 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 PDE11AQ9HCR9 933 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 FAM105AQ9NUU6 356 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 RBAKQ9NYW8 714 aaPredicted RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 LIMA1Q9UHB6 759 aaKnown RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 TRIM49P0CI25 452 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 TRIM49CP0CI26 452 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 EEF1GP26641 437 aaKnown RBP18.34■□□□□ 0.53
NF1-211ENST00000487476 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 MFSD5Q6N075 450 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 LPPQ93052 612 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 CCDC51Q96ER9 411 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 KIAA1586Q9HCI6 787 aa18.34■□□□□ 0.53
NF1-211ENST00000487476 EVI5O60447 810 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 SERPINC1P01008 464 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 GRM5P41594 1212 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 SPAG1Q07617 926 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 SLC10A6Q3KNW5 377 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 DCAF17Q5H9S7 520 aaPredicted RBP18.33■□□□□ 0.53
NF1-211ENST00000487476 MIIPQ5JXC2 388 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 LMBRD2Q68DH5 695 aaPredicted RBP18.33■□□□□ 0.53
NF1-211ENST00000487476 TMEM130Q8N3G9 435 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 SEPT8Q92599 483 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 TOPORSQ9NS56 1045 aaPredicted RBP18.33■□□□□ 0.53
NF1-211ENST00000487476 IFNKQ9P0W0 207 aa18.33■□□□□ 0.53
NF1-211ENST00000487476 LRRC10BA6NIK2 292 aa18.33■□□□□ 0.52
NF1-211ENST00000487476 CLTAP09496 248 aa18.33■□□□□ 0.52
NF1-211ENST00000487476 ACRP10323 421 aa18.33■□□□□ 0.52
NF1-211ENST00000487476 DLATP10515 647 aaKnown RBP18.33■□□□□ 0.52
NF1-211ENST00000487476 VAMP7P51809 220 aa18.33■□□□□ 0.52
NF1-211ENST00000487476 COPB1P53618 953 aaKnown RBP18.33■□□□□ 0.52
NF1-211ENST00000487476 BFSP1Q12934 665 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms