RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 SPDYE2Q495Y8 402 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
CCNL1-216ENST00000475298 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 IFT43Q96FT9 208 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 RAB17Q9H0T7 212 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 SYNPO2Q9UMS6 1093 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 NFIBO00712 420 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 SNX3O60493 162 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 HIP1RO75146 1068 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 PDHA1P08559 390 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 MAGEA8P43361 318 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 FMO5P49326 533 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 TBC1D10BQ4KMP7 808 aaPredicted RBP13.94□□□□□ -0.18
CCNL1-216ENST00000475298 DAW1Q8N136 415 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 OGFOD1Q8N543 542 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 PHC3Q8NDX5 983 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 LNX1Q8TBB1 728 aaPredicted RBP13.94□□□□□ -0.18
CCNL1-216ENST00000475298 NACC1Q96RE7 527 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
CCNL1-216ENST00000475298 FLOT1O75955 427 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 WFS1O76024 890 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 ATP6V1C1P21283 382 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 SP100P23497 879 aaPredicted RBP13.93□□□□□ -0.18
CCNL1-216ENST00000475298 CAP2P40123 477 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 MAPK7Q13164 816 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 CMPK2Q5EBM0 449 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 RNF220Q5VTB9 566 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 RBM12BQ8IXT5 1001 aaKnown RBP13.93□□□□□ -0.18
CCNL1-216ENST00000475298 BICD1Q96G01 975 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 RPS6KC1Q96S38 1066 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 PRMT1Q99873 361 aaKnown RBP13.93□□□□□ -0.18
CCNL1-216ENST00000475298 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 WDR11Q9BZH6 1224 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 TRIM4Q9C037 500 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
CCNL1-216ENST00000475298 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 NENFQ9UMX5 172 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 PSME4Q14997 1843 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 ARHGEF35A5YM69 484 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 DAPK3O43293 454 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 CEP104O60308 925 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 LRRN2O75325 713 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 ATP11AP98196 1134 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 FOXB2Q5VYV0 432 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 TPCN2Q8NHX9 752 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 TAF4BQ92750 862 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 PLEKHG4BQ96PX9 1271 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 PCIF1Q9H4Z3 704 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 HOMER2Q9NSB8 354 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 DNAJC12Q9UKB3 198 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 CCPG1Q9ULG6 757 aa13.93□□□□□ -0.18
CCNL1-216ENST00000475298 ZNF536O15090 1300 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 BTNL10A8MVZ5 291 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 LACTBP83111 547 aaPredicted RBP13.92□□□□□ -0.18
CCNL1-216ENST00000475298 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
CCNL1-216ENST00000475298 DRAP1Q14919 205 aaPredicted RBP13.92□□□□□ -0.18
CCNL1-216ENST00000475298 OR52E8Q6IFG1 317 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 B3GNT9Q6UX72 402 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 HS2ST1Q7LGA3 356 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 CPXCR1Q8N123 301 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 UTP4Q969X6 686 aaKnown RBP13.92□□□□□ -0.18
CCNL1-216ENST00000475298 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 MXRA8Q9BRK3 442 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 ZNF341Q9BYN7 854 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 TXLNGYQ9BZA5 131 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 EPB41L4BQ9H329 900 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 PCDHGA4Q9Y5G9 962 aa13.92□□□□□ -0.18
CCNL1-216ENST00000475298 TULP1O00294 542 aaPredicted RBP13.91□□□□□ -0.18
CCNL1-216ENST00000475298 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 STAT1P42224 750 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 DLG4P78352 724 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 EN1Q05925 392 aaPredicted RBP13.91□□□□□ -0.18
CCNL1-216ENST00000475298 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 LRRC23Q53EV4 343 aaPredicted RBP13.91□□□□□ -0.18
CCNL1-216ENST00000475298 C10orf76Q5T2E6 689 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 TMEM154Q6P9G4 183 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 LMNTD2Q8IXW0 634 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 SYCP3Q8IZU3 236 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 ZSWIM2Q8NEG5 633 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 GPR88Q9GZN0 384 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 OSGEPQ9NPF4 335 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 KCNH7Q9NS40 1196 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 FRMD4BQ9Y2L6 1034 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
CCNL1-216ENST00000475298 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
CCNL1-216ENST00000475298 K7ENM7 598 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms