RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ATG9AQ7Z3C6 839 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 FAM9CQ8IZT9 166 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 CALML6Q8TD86 181 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 ZBTB18Q99592 522 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 FOXP3Q9BZS1 431 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 ZCCHC2Q9C0B9 1178 aaKnown RBP4.92□□□□□ -1.62
CCNL1-215ENST00000474539 GPR88Q9GZN0 384 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 TAB2Q9NYJ8 693 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 SMARCAL1Q9NZC9 954 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 GCNT4Q9P109 453 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 TTLL3Q9Y4R7 772 aa4.92□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 RSPH10B2B2RC85 870 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC188H7C350 402 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TRIM66O15016 1216 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MAP3K13O43283 966 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 NR3C1P04150 777 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 KRT1P04264 644 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 RSPH10BP0C881 870 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PDHBP11177 359 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ACADMP11310 421 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PLCG1P19174 1290 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 HOXA13P31271 388 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 DPP6P42658 865 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ACVR2BQ13705 512 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MFSD10Q14728 455 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PDIA6Q15084 440 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TRADDQ15628 312 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 FSCN1Q16658 493 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 P3H1Q32P28 736 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 Q4G0T1 1027 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PRAMEF18Q5VWM3 479 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CCDC62Q6P9F0 684 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 C4orf19Q8IY42 314 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SHDQ96IW2 340 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 LRRC37BQ96QE4 947 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CAMKK2Q96RR4 588 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 NT5C1AQ9BXI3 368 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ZNF518BQ9C0D4 1074 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 BRD8Q9H0E9 1235 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 LY9Q9HBG7 655 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 A0A087WZ62 844 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 GOLGA8IPA6NC78 632 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 THP07101 528 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 COL6A1P12109 1028 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CYP11B2P19099 503 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 OR1G1P47890 313 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ANXA11P50995 505 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PRKCEQ02156 737 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PTH1RQ03431 593 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TGM3Q08188 693 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CUL4AQ13619 759 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CTTNQ14247 550 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PTK2BQ14289 1009 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 UBE2SQ16763 222 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 LONRF3Q496Y0 759 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PPM1LQ5SGD2 360 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 DENND2CQ68D51 928 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TIGD7Q6NT04 549 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 EFCAB12Q6NXP0 572 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CYFIP1Q7L576 1253 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PATL1Q86TB9 770 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ANKS1AQ92625 1134 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TSPAN17Q96FV3 270 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PPP1R13BQ96KQ4 1090 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TMEM39BQ9GZU3 492 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ZMYND12Q9H0C1 365 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 VCX3BQ9H321 246 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ASB7Q9H672 318 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SLC39A2Q9NP94 309 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ZBTB12Q9Y330 459 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 FMN2Q9NZ56 1722 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 A0A1W2PQ67 120 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 ARHGAP42A6NI28 874 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MYMKA6NI61 221 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 OGTO15294 1046 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 COBLO75128 1261 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TRPA1O75762 1119 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MYBL2P10244 700 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 VCAM1P19320 739 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PSMA3P25788 255 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 RPA1P27694 616 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SOX5P35711 763 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 CACNB3P54284 484 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SH3BGRP55822 239 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 POLR2FP61218 127 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MAP1SQ66K74 1059 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 HDXQ7Z353 690 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TLK2Q86UE8 772 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 MFN1Q8IWA4 741 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 SLC7A14Q8TBB6 771 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 AKT1S1Q96B36 256 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 PPP1R16AQ96I34 528 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 LARP6Q9BRS8 491 aaKnown RBP4.91□□□□□ -1.62
CCNL1-215ENST00000474539 TINF2Q9BSI4 451 aa4.91□□□□□ -1.62
CCNL1-215ENST00000474539 KIFC3Q9BVG8 833 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms