RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 K7ERI5 159 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 TEX28O15482 410 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 THP07101 528 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 DSG1Q02413 1049 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 DMP1Q13316 513 aaPredicted RBP9.93□□□□□ -0.82
USF1-204ENST00000472217 TUSC3Q13454 348 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 CUL4AQ13619 759 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
USF1-204ENST00000472217 DCAF4L1Q3SXM0 396 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 KIAA0319Q5VV43 1072 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 ARL6IP4Q66PJ3 421 aaKnown RBP9.93□□□□□ -0.82
USF1-204ENST00000472217 TMC5Q6UXY8 1006 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 HFE2Q6ZVN8 426 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 C1orf186Q6ZWK4 172 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 TAS1R3Q7RTX0 852 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 BRAPQ7Z569 592 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 NECTIN4Q96NY8 510 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 PLIN2Q99541 437 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 NT5C3AQ9H0P0 336 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 SFXN1Q9H9B4 322 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 RXFP1Q9HBX9 757 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 KMT5AQ9NQR1 393 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 MAN1C1Q9NR34 630 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 CHST7Q9NS84 486 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 ARHGAP28Q9P2N2 729 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 TNFSF13BQ9Y275 285 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 SSX2IPQ9Y2D8 614 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 GDAQ9Y2T3 454 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 NR2E1Q9Y466 385 aa9.93□□□□□ -0.82
USF1-204ENST00000472217 VPS37CA5D8V6 355 aaPredicted RBP9.92□□□□□ -0.82
USF1-204ENST00000472217 CASTOR2A6NHX0 329 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 SPDYE4A6NLX3 237 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 SFI1A8K8P3 1242 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 C2CD4DB7Z1M9 353 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 SLC16A4O15374 487 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 KIF4AO95239 1232 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 ADH1AP07327 375 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 GUCY2CP25092 1073 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 ZXDAP98168 799 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 PTPN21Q16825 1174 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 USP41Q3LFD5 358 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 ZNF568Q3ZCX4 644 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 TMEM119Q4V9L6 283 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 ATAT1Q5SQI0 421 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 TRIM67Q6ZTA4 783 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 KCTD17Q8N5Z5 321 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 CEP120Q8N960 986 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 SYT2Q8N9I0 419 aaPredicted RBP9.92□□□□□ -0.82
USF1-204ENST00000472217 HASPINQ8TF76 798 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 CDK5RAP3Q96JB5 506 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 ACO2Q99798 780 aaKnown RBP9.92□□□□□ -0.82
USF1-204ENST00000472217 TIPINQ9BVW5 301 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 CDT1Q9H211 546 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 C17orf75Q9HAS0 396 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 C2orf16Q68DN1 1984 aa9.92□□□□□ -0.82
USF1-204ENST00000472217 C5orf42Q9H799 3197 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 SF3B1O75533 1304 aaKnown RBP eCLIP9.91□□□□□ -0.826e-7■■■■■ 71.8
USF1-204ENST00000472217 ABLIM1O14639 778 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 TADA2AO75478 443 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 GLUD1P00367 558 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 SPATA31D3P0C874 917 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 MYBP10242 640 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 PLS3P13797 630 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 RPL17P18621 184 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 PLA2G5P39877 138 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 SLC12A3P55017 1021 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 GRIN1Q05586 938 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 GLRA4Q5JXX5 417 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 RTP2Q5QGT7 225 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 PRSS55Q6UWB4 352 aaPredicted RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 SPATA31D4Q6ZUB0 917 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 GPR149Q86SP6 731 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 GLYCTKQ8IVS8 523 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 GPR65Q8IYL9 337 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 LRRC15Q8TF66 581 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 SPIRE2Q8WWL2 714 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 RIN2Q8WYP3 895 aaPredicted RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 AK8Q96MA6 479 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 PPP1R10Q96QC0 940 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 NTPCRQ9BSD7 190 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 TARS2Q9BW92 718 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 PTPRHQ9HD43 1115 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
USF1-204ENST00000472217 FNIP2Q9P278 1114 aa9.91□□□□□ -0.82
USF1-204ENST00000472217 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 RBM19Q9Y4C8 960 aaKnown RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 ARIH1Q9Y4X5 557 aaPredicted RBP9.91□□□□□ -0.82
USF1-204ENST00000472217 NPHP3-ACAD11A0A0J9YXS1 232 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 TMEM221A6NGB7 291 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 M0R296 226 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 TGM5O43548 720 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 RFPL2O75678 378 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 BMP15O95972 392 aa9.9□□□□□ -0.82
USF1-204ENST00000472217 PLA2G4BP0C869 781 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms