RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ANKFY1Q9P2R3 1169 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 TRIOO75962 3097 aa16.34■□□□□ 0.21
CDC42SE1-203ENST00000470278 A0A0B4J269 797 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 FAM189A1O60320 539 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 UPP2O95045 317 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 KIF20AO95235 890 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 PTMSP20962 102 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 GRM5P41594 1212 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 KYAT1Q16773 422 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 CLLU1OSQ5K130 101 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 AGMOQ6ZNB7 445 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 CMTR2Q8IYT2 770 aaKnown RBP16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 UHRF1Q96T88 793 aaPredicted RBP16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZBED2Q9BTP6 218 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 TMEM117Q9H0C3 514 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 RSAD1Q9HA92 442 aa16.33■□□□□ 0.2
CDC42SE1-203ENST00000470278 FGFR1P11362 822 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 ITGA4P13612 1032 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 COL9A1P20849 921 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 GARTP22102 1010 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 ADSSP30520 456 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZNF658Q5TYW1 1059 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 GLB1LQ6UWU2 654 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 SYCP3Q8IZU3 236 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 TRIML1Q8N9V2 468 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZBTB45Q96K62 511 aaPredicted RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 TCHPQ9BT92 498 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 MRPL9Q9BYD2 267 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 HAPLN2Q9GZV7 340 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 KIAA1468Q9P260 1216 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 GIT1Q9Y2X7 761 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 HES2Q9Y543 173 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 C5orf42Q9H799 3197 aa16.32■□□□□ 0.2
CDC42SE1-203ENST00000470278 KIAA1671Q9BY89 1806 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 MEIS3P2A8K0S8 358 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 ANKRD63C9JTQ0 380 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 ABI1Q8IZP0 508 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 LRRC43Q8N309 656 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 GOLGA5Q8TBA6 731 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 LPPQ93052 612 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 CCDC94Q9BW85 323 aaPredicted RBP16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 IKZF4Q9H2S9 585 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 MAN1B1Q9UKM7 699 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 CITO14578 2027 aa16.31■□□□□ 0.2
CDC42SE1-203ENST00000470278 TISP43B9A030 160 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 KIAA0391O15091 583 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 OGTO15294 1046 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 TGFB1I1O43294 461 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 OFD1O75665 1012 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 RECQL4O94761 1208 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 POU5F1Q01860 360 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 MORC3Q14149 939 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 CAMK4Q16566 473 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 ZBTB33Q86T24 672 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 CEP120Q8N960 986 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 HELQQ8TDG4 1101 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 KCTD10Q9H3F6 313 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 PDCD11Q14690 1871 aaKnown RBP16.3■□□□□ 0.2
CDC42SE1-203ENST00000470278 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 TDRD15B5MCY1 1934 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 LINC01553A4QN01 128 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 ARL5CA6NH57 179 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 PDXKO00764 312 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 CLTAP09496 248 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 LINC00271P0C7V0 271 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 IBSPP21815 317 aaPredicted RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 AKAP5P24588 427 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 MLH1P40692 756 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 PPP1R2P41236 205 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.23e-6■■□□□ 12.7
CDC42SE1-203ENST00000470278 GATMP50440 423 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 XKR4Q5GH76 650 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 NOMO2Q5JPE7 1267 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 NELFCDQ8IXH7 590 aa16.29■□□□□ 0.2
CDC42SE1-203ENST00000470278 ARNTL2Q8WYA1 636 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms