RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 ACOT2P49753 483 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 SNRNP35Q16560 246 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 CCDC40Q4G0X9 1142 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 DUSP9Q99956 384 aaKnown RBP13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 TRAIPQ9BWF2 469 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 THAP9Q9H5L6 903 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 UBN1Q9NPG3 1134 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 SNTG2Q9NY99 539 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 IPPQ9Y573 584 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 PCDHB7Q9Y5E2 793 aa13.56□□□□□ -0.24
GTF3C2-208ENST00000457748 ABLIM1O14639 778 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 ZNF623O75123 536 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 EOMESO95936 686 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 TPM2P07951 284 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 CDK11BP21127 795 aaKnown RBP13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 OTOP2Q7RTS6 562 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 FILIP1Q7Z7B0 1213 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 ECHDC2Q86YB7 292 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 TMEM174Q8WUU8 243 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 MKNK1Q9BUB5 465 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 HAPLN2Q9GZV7 340 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 RBAKQ9NYW8 714 aaPredicted RBP13.55□□□□□ -0.24
GTF3C2-208ENST00000457748 C9IYK1 514 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 HOXA2O43364 376 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 IL18RAPO95256 599 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 AKAP5P24588 427 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 MAGEA10P43363 369 aaPredicted RBP13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 SURF1Q15526 300 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 RTN4RL1Q86UN2 441 aaPredicted RBP13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 ABI1Q8IZP0 508 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 LINC01599Q8WXQ3 324 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 TMEM161AQ9NX61 479 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 ARMCX3Q9UH62 379 aaPredicted RBP13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 HES2Q9Y543 173 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
GTF3C2-208ENST00000457748 MAPK13O15264 365 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 AKAP3O75969 853 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 RECQL4O94761 1208 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 UPP2O95045 317 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CXCL8P10145 99 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 MTIF2P46199 727 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CASP4P49662 377 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 FAM189BP81408 668 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 POU5F1Q01860 360 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 SPAG1Q07617 926 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 TMEM240Q5SV17 173 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 GLB1LQ6UWU2 654 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 LRRC55Q6ZSA7 311 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 FRMD5Q7Z6J6 570 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 MRPL10Q7Z7H8 261 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 NPAS4Q8IUM7 802 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CD302Q8IX05 232 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 DHX40Q8IX18 779 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CEP120Q8N960 986 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 ZSWIM2Q8NEG5 633 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 URGCPQ8TCY9 931 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 LPPQ93052 612 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CNOT6LQ96LI5 555 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 RSAD1Q9HA92 442 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 PLEKHA5Q9HAU0 1116 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 FANCLQ9NW38 375 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 CPSF3Q9UKF6 684 aaKnown RBP13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
GTF3C2-208ENST00000457748 TET1Q8NFU7 2136 aa13.52□□□□□ -0.24
GTF3C2-208ENST00000457748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 H0YGN5 161 aa13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 PES1O00541 588 aaKnown RBP13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 STX10O60499 249 aa13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 TNFSF9P41273 254 aa13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 WDR5P61964 334 aaKnown RBP13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 CYP24A1Q07973 514 aa13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 IQCB1Q15051 598 aa13.52□□□□□ -0.25
GTF3C2-208ENST00000457748 ENOX2Q16206 610 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms