RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NAIPQ13075 1403 aa5.46□□□□□ -1.54
LINC00393-202ENST00000452852 NPEPPSL1A6NEC2 478 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 IL33O95760 270 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 CFBP00751 764 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 CYP17A1P05093 508 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 ADRB1P08588 477 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 LPOP22079 712 aaPredicted RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 ALDH6A1Q02252 535 aaKnown RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 EFEMP1Q12805 493 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 EIF4HQ15056 248 aaKnown RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 TERF2Q15554 542 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 CLUL1Q15846 466 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 ARHGAP29Q52LW3 1261 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 C10orf62Q5T681 223 aaPredicted RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF772Q68DY9 489 aaPredicted RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 LARP4Q71RC2 724 aaKnown RBP eCLIP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 CMTR2Q8IYT2 770 aaKnown RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 IFNL2Q8IZJ0 200 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 HSPBAP1Q96EW2 488 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 IL17RAQ96F46 866 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 ELF4Q99607 663 aaPredicted RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 FOXB1Q99853 325 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 TOMM22Q9NS69 142 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 FAM50BQ9Y247 325 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 NOC2LQ9Y3T9 749 aaKnown RBP5.45□□□□□ -1.54
LINC00393-202ENST00000452852 PTPRUQ92729 1446 aa5.45□□□□□ -1.54
LINC00393-202ENST00000452852 A0A0G2JNJ9 132 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 HFM1A2PYH4 1435 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 GPR42O15529 346 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 PRLP01236 227 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 HMGCRP04035 888 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 TRIM27P14373 513 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 APEX1P27695 318 aaKnown RBP5.44□□□□□ -1.54
LINC00393-202ENST00000452852 CYP2C19P33261 490 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 GPR3P46089 330 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 NOLC1Q14978 699 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00393-202ENST00000452852 ACAP2Q15057 778 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 ZXDCQ2QGD7 858 aaPredicted RBP5.44□□□□□ -1.54
LINC00393-202ENST00000452852 SPATS1Q496A3 300 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 COBLL1Q53SF7 1204 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 TMEM240Q5SV17 173 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 SLFN13Q68D06 897 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 TMEM200BQ69YZ2 307 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 GRAMD4Q6IC98 578 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 E2F7Q96AV8 911 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 LOXL4Q96JB6 756 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 SARGQ9BW04 601 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF700Q9H0M5 742 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 MEGF9Q9H1U4 602 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 SLC12A5Q9H2X9 1139 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 ADGRL3Q9HAR2 1447 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 PRDM11Q9NQV5 511 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 Q9UFV3 132 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 IFT172Q9UG01 1749 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 USP25Q9UHP3 1055 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 SAP30BPQ9UHR5 308 aaKnown RBP5.44□□□□□ -1.54
LINC00393-202ENST00000452852 RCAN3Q9UKA8 241 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 MRFAP1Q9Y605 127 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 LRP6O75581 1613 aa5.44□□□□□ -1.54
LINC00393-202ENST00000452852 FRMPD2Q68DX3 1309 aaPredicted RBP5.44□□□□□ -1.54
LINC00393-202ENST00000452852 METP08581 1390 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 MST1RQ04912 1400 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 UBA6A0AVT1 1052 aaPredicted RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 APAF1O14727 1248 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 NBPF7P0C2Y1 421 aaPredicted RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 U2AF1L5P0DN76 240 aaPredicted RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 RGS3P49796 1198 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SMAD3P84022 425 aaKnown RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 PURAQ00577 322 aaKnown RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 U2AF1Q01081 240 aaKnown RBP eCLIP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SLC6A3Q01959 620 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 PDCD1Q15116 288 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF827Q17R98 1081 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 RNF151Q2KHN1 245 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 ZNF568Q3ZCX4 644 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 BRINP3Q76B58 766 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 RASSF3Q86WH2 238 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 TGFBRAP1Q8WUH2 860 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 LRRC59Q96AG4 307 aaKnown RBP5.43□□□□□ -1.54
LINC00393-202ENST00000452852 MAML3Q96JK9 1138 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SCYL1Q96KG9 808 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SAMD11Q96NU1 681 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 LMF1Q96S06 567 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 KIAA1683Q9H0B3 1180 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SEC61A2Q9H9S3 476 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SMPD4Q9NXE4 827 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 SPO11Q9Y5K1 396 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 RPGRIP1LQ68CZ1 1315 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 KNDC1Q76NI1 1749 aa5.43□□□□□ -1.54
LINC00393-202ENST00000452852 CCDC144AA2RUR9 1427 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 PTCH1Q13635 1447 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 SETD5Q9C0A6 1442 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 LAMC1P11047 1609 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 KLHL33A6NCF5 533 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 ZRANB2O95218 330 aaKnown RBP eCLIP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 IFIT2P09913 472 aaKnown RBP5.42□□□□□ -1.54
LINC00393-202ENST00000452852 MYBP10242 640 aa5.42□□□□□ -1.54
LINC00393-202ENST00000452852 LSP1P33241 339 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms