RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SV2AQ7L0J3 742 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 OR2W6PQ8NHA6 318 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 BICD1Q96G01 975 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 IFT74Q96LB3 600 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 ERP44Q9BS26 406 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 XPNPEP1Q9NQW7 623 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 RGS17Q9UGC6 210 aaPredicted RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 CHORDC1Q9UHD1 332 aaPredicted RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 RASAL2Q9UJF2 1139 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 GJA3Q9Y6H8 435 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 DLATP10515 647 aaKnown RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 CCT5P48643 541 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 SP4Q02446 784 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 DHX9Q08211 1270 aaKnown RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 TMEM132BQ14DG7 1078 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 JAMLQ86YT9 394 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
NUP50-203ENST00000407019 FMO2Q99518 471 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 CYP26B1Q9NR63 512 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 UVRAGQ9P2Y5 699 aa18.1■□□□□ 0.49
NUP50-203ENST00000407019 COL11A1P12107 1806 aaPredicted RBP18.09■□□□□ 0.49
NUP50-203ENST00000407019 H0YCG3 227 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 STAM2O75886 525 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 CHRNA3P32297 505 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 ABCD1P33897 745 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 PEX5P50542 639 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 ACTR2P61160 394 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 GNPTABQ3T906 1256 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 CD101Q93033 1021 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 FAM213AQ9BRX8 229 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 POLR3FQ9H1D9 316 aaPredicted RBP18.09■□□□□ 0.49
NUP50-203ENST00000407019 CENPHQ9H3R5 247 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 ACAD9Q9H845 621 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 CYP39A1Q9NYL5 469 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 TELO2Q9Y4R8 837 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 RLFQ13129 1914 aa18.09■□□□□ 0.49
NUP50-203ENST00000407019 C19orf81C9J6K1 198 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 ATP2A1O14983 1001 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 SPOPO43791 374 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 ERLIN2O94905 339 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 CTNNA2P26232 953 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.49
NUP50-203ENST00000407019 BIRC3Q13489 604 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 SKIDA1Q1XH10 827 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 SPDYCQ5MJ68 293 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 ENOSF1Q7L5Y1 443 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 DDX1Q92499 740 aaKnown RBP18.08■□□□□ 0.49
NUP50-203ENST00000407019 DHX38Q92620 1227 aaKnown RBP18.08■□□□□ 0.49
NUP50-203ENST00000407019 GLG1Q92896 1179 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 TATDN2Q93075 761 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 RABEP2Q9H5N1 569 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 A1CFQ9NQ94 594 aaKnown RBP18.08■□□□□ 0.49
NUP50-203ENST00000407019 ARHGAP28Q9P2N2 729 aa18.08■□□□□ 0.49
NUP50-203ENST00000407019 ZC3H11AO75152 810 aaKnown RBP eCLIP18.08■□□□□ 0.48
NUP50-203ENST00000407019 PPFIA2O75334 1257 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 KRT5P13647 590 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 GCNT1Q02742 428 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 ACAD10Q6JQN1 1059 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 ABHD15Q6UXT9 468 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 TAS1R3Q7RTX0 852 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 EFCAB13Q8IY85 973 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 ARFGAP2Q8N6H7 521 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 PRELID2Q8N945 189 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 C18orf8Q96DM3 657 aa18.08■□□□□ 0.48
NUP50-203ENST00000407019 SPATA31C2B4DYI2 1134 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 MYO1FO00160 1098 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 EBAG9O00559 213 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 PTGIRP43119 386 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 GUCY1A3Q02108 690 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 MTERF2Q49AM1 385 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 MAGOHBQ96A72 148 aaKnown RBP18.07■□□□□ 0.48
NUP50-203ENST00000407019 BTBD6Q96KE9 485 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 FAM81BQ96LP2 452 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 TXLNGYQ9BZA5 131 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 C1orf112Q9NSG2 853 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 ZDHHC18Q9NUE0 388 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 FEZ2Q9UHY8 353 aaPredicted RBP18.07■□□□□ 0.48
NUP50-203ENST00000407019 EXTL3O43909 919 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 ZEB2O60315 1214 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 SORBS3O60504 671 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 SUPT20HL2P0C7V6 817 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 LSP1P33241 339 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 MDH1P40925 334 aaKnown RBP18.07■□□□□ 0.48
NUP50-203ENST00000407019 LIG4P49917 911 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 DRG2P55039 364 aaKnown RBP18.07■□□□□ 0.48
NUP50-203ENST00000407019 CLEC16AQ2KHT3 1053 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 SUPT20HL1Q3ZLR7 823 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 XKR3Q5GH77 459 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 AGBL2Q5U5Z8 902 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 CATSPERGQ6ZRH7 1159 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
NUP50-203ENST00000407019 C10orf67Q8IYJ2 551 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 ELMO3Q96BJ8 720 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 PI4K2AQ9BTU6 479 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 KIAA1586Q9HCI6 787 aa18.07■□□□□ 0.48
NUP50-203ENST00000407019 PCYOX1Q9UHG3 505 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms