RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ANKFY1Q9P2R3 1169 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 DKK2Q9UBU2 259 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 SCOCQ9UIL1 159 aa4.74□□□□□ -1.65
TRAV40-201ENST00000390467 TMA7Q9Y2S6 64 aaKnown RBP4.74□□□□□ -1.65
TRAV40-201ENST00000390467 CXorf49A8MYA2 514 aaPredicted RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 AKR1B10O60218 316 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 SCAND1P57086 179 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 MRPS9P82933 396 aaKnown RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 SRSF2Q01130 221 aaKnown RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 PPP3CAQ08209 521 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 PTPAQ15257 358 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 TOR2AQ5JU69 321 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 FAM102AQ5T9C2 384 aaPredicted RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 Q6YL49 198 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 DCLRE1CQ96SD1 692 aaKnown RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 ADAM2Q99965 735 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 SLKQ9H2G2 1235 aaPredicted RBP4.73□□□□□ -1.65
TRAV40-201ENST00000390467 C14orf119Q9NWQ9 140 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 CLCA2Q9UQC9 943 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 ATRNL1Q5VV63 1379 aa4.73□□□□□ -1.65
TRAV40-201ENST00000390467 UNC119BA6NIH7 251 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 TMEM200CA6NKL6 621 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 MARCH11A6NNE9 402 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 RNASET2O00584 256 aaKnown RBP4.72□□□□□ -1.65
TRAV40-201ENST00000390467 BRINP1O60477 761 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 PRKD3O94806 890 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 NDUFA10O95299 355 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 GCP02774 474 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 ALOX15P16050 662 aaPredicted RBP4.72□□□□□ -1.65
TRAV40-201ENST00000390467 PTPN7P35236 360 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 FLT3LGP49771 235 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 CHN2P52757 468 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 EFCAB12Q6NXP0 572 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 ZNF572Q7Z3I7 529 aaPredicted RBP4.72□□□□□ -1.65
TRAV40-201ENST00000390467 OR7D4Q8NG98 312 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 COG1Q8WTW3 980 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 AUTS2Q8WXX7 1259 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 PAWRQ96IZ0 340 aaKnown RBP4.72□□□□□ -1.65
TRAV40-201ENST00000390467 IFT122Q9HBG6 1241 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 CCM2LQ9NUG4 571 aaPredicted RBP4.72□□□□□ -1.65
TRAV40-201ENST00000390467 POGKQ9P215 609 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 COL4A3Q01955 1670 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 PNPLA7Q6ZV29 1317 aa4.72□□□□□ -1.65
TRAV40-201ENST00000390467 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 VIL1P09327 827 aaKnown RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 POU3F3P20264 500 aaPredicted RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 GPR3P46089 330 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 CT47A1Q5JQC4 288 aaPredicted RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 HECTD2Q5U5R9 776 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 PDZD4Q76G19 769 aaPredicted RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 PLXDC1Q8IUK5 500 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 ARHGEF19Q8IW93 802 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 CPEB3Q8NE35 698 aaKnown RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 GPR156Q8NFN8 814 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 ZG16BQ96DA0 208 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 WDR11Q9BZH6 1224 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 SERHL2Q9H4I8 314 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 LDAHQ9H6V9 325 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 MAP3K2Q9Y2U5 619 aa4.71□□□□□ -1.66
TRAV40-201ENST00000390467 USP15Q9Y4E8 981 aaPredicted RBP4.71□□□□□ -1.66
TRAV40-201ENST00000390467 DIRC3C9JPN6 131 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 GPR39O43194 453 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 B3GALT2O43825 422 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 PHF2O75151 1096 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 PPFIA4O75335 1185 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 RBP3P10745 1247 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 OSMP13725 252 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 BMP5P22003 454 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 MGAT1P26572 445 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 ECHS1P30084 290 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 ADRA1BP35368 520 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 SREBF1P36956 1147 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 RAP2BP61225 183 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 SEPT2Q15019 361 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 FAM47AQ5JRC9 791 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 ATXN7L2Q5T6C5 722 aaPredicted RBP4.7□□□□□ -1.66
TRAV40-201ENST00000390467 AFMIDQ63HM1 303 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 DNAJC10Q8IXB1 793 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 PQLC1Q8N2U9 271 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 PHACTR3Q96KR7 559 aa4.7□□□□□ -1.66
TRAV40-201ENST00000390467 ACE2Q9BYF1 805 aaPredicted RBP4.7□□□□□ -1.66
TRAV40-201ENST00000390467 CCDC78A2IDD5 438 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 DRGXA6NNA5 263 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 PJA2O43164 708 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 LMNAP02545 664 aaKnown RBP4.69□□□□□ -1.66
TRAV40-201ENST00000390467 FPR1P21462 350 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 TGM1P22735 817 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 GUCY1A2P33402 732 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 BMPR1AP36894 532 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 ALDH1A3P47895 512 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 SLC6A9P48067 706 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 MTNR1BP49286 362 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 CLRN1P58418 232 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 ERVK-21P61565 698 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 TP53BP2Q13625 1128 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 MUM1L1Q5H9M0 696 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms