RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 WDR66Q8TBY9 1149 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 GCC1Q96CN9 775 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 SRPK1Q96SB4 655 aaKnown RBP6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 ZNF341Q9BYN7 854 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 CPA4Q9UI42 421 aa6.4□□□□□ -1.38
RNU4-4P-201ENST00000364588 MYH2Q9UKX2 1941 aa6.4□□□□□ -1.39
RNU4-4P-201ENST00000364588 DOCK2Q92608 1830 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 TCRBV5S2A0A599 114 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 GNAT1P11488 350 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 LACTBP83111 547 aaPredicted RBP6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 PPATQ06203 517 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 ATP2B3Q16720 1220 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 VMACQ2NL98 169 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 FKBP1CQ5VVH2 108 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 CDC42EP5Q6NZY7 148 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 ATG9AQ7Z3C6 839 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 KYQ8NBH2 561 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM151AQ8WW52 585 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 LPIN2Q92539 896 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 PTPRN2Q92932 1015 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 HOOK2Q96ED9 719 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 GORASP1Q9BQQ3 440 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 MRIQ9BWK5 157 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 SMC4Q9NTJ3 1288 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 USP40Q9NVE5 1235 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 KIF16BQ96L93 1317 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 RPAP1Q9BWH6 1393 aaPredicted RBP6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 MGAMO43451 1857 aa6.39□□□□□ -1.39
RNU4-4P-201ENST00000364588 PDHXO00330 501 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 SOD2P04179 222 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 UBTFL1P0CB47 393 aaPredicted RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 HOXA5P20719 270 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 CTGFP29279 349 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ADORA1P30542 326 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 THBS2P35442 1172 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 PSMC4P43686 418 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 PHKA1P46020 1223 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 KCNC1P48547 511 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 SLURP1P55000 103 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ITGA1P56199 1179 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 GABREP78334 506 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 C17orf99Q6UX52 265 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 OTOP3Q7RTS5 596 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZFPM1Q8IX07 1006 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 CARFQ8N187 725 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 TP53I13Q8NBR0 393 aaPredicted RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 PIP4K2CQ8TBX8 421 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 NOX5Q96PH1 765 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 C11orf84Q9BUA3 381 aaPredicted RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 OSBPL2Q9H1P3 480 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZCCHC17Q9NP64 241 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 GNL3LQ9NVN8 582 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 RTEL1Q9NZ71 1219 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 PPARGC1AQ9UBK2 798 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ASH2LQ9UBL3 628 aa6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 PA2G4Q9UQ80 394 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 LRRFIP2Q9Y608 721 aaKnown RBP6.38□□□□□ -1.39
RNU4-4P-201ENST00000364588 ADGRA2Q96PE1 1338 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 BLACEA4D250 179 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 CIAO1O76071 339 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 STAT5AP42229 794 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 RGS3P49796 1198 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 PAK1Q13153 545 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 MOGSQ13724 837 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 ALDH1L2Q3SY69 923 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 ERICH6BQ5W0A0 696 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 LILRA6Q6PI73 481 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 ANKRD23Q86SG2 305 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 ARRDC4Q8NCT1 418 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 UHMK1Q8TAS1 419 aaKnown RBP6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 RAET1EQ8TD07 263 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 EXOC2Q96KP1 924 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 TMEM209Q96SK2 561 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 JAM3Q9BX67 310 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 ZNF112Q9UJU3 913 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 DENND2AQ9ULE3 1009 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 NOB1Q9ULX3 412 aaKnown RBP6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 MRPS23Q9Y3D9 190 aaKnown RBP6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 PTPRFP10586 1907 aa6.37□□□□□ -1.39
RNU4-4P-201ENST00000364588 DOCK1Q14185 1865 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 MYPNQ86TC9 1320 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 SALL1Q9NSC2 1324 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FAM221BA6H8Z2 402 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 H0YGN5 161 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 CYP7B1O75881 506 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 IL15P40933 162 aaPredicted RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 SARSP49591 514 aaKnown RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 FXR1P51114 621 aaKnown RBP eCLIP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 PRMT2P55345 433 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 GJA9P57773 515 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 TIMM10P62072 90 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 PRKCZQ05513 592 aa6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 SMAD4Q13485 552 aaKnown RBP6.36□□□□□ -1.39
RNU4-4P-201ENST00000364588 PICALMQ13492 652 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms