RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.51□□□□□ -1.212e-7■■□□□ 13.4
RAB5B-201ENST00000360299 RAB3IL1Q8TBN0 382 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 RBM41Q96IZ5 413 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ADAM22Q9P0K1 906 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 AGO2Q9UKV8 859 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PLCH1Q4KWH8 1693 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 RPTORQ8N122 1335 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 FAM170AA1A519 330 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 FAM205CA6NFA0 338 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 TRAPPC3O43617 180 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PLS3P13797 630 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 NDUFV1P49821 464 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 GUCY2FP51841 1108 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 EMBQ6PCB8 327 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 HEXIM2Q96MH2 286 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 FAM213AQ9BRX8 229 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 BNIP3LO60238 219 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PRPSAP2O60256 369 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 KCNA3P22001 575 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 EIF3BP55884 814 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 NLRP11P59045 1033 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PSMC6P62333 389 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 TAP1Q03518 808 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF699Q32M78 642 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 ALS2CLQ60I27 953 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 IQSEC1Q6DN90 963 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 OR6B2Q6IFH4 312 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 RIOX2Q8IUF8 465 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 CCT6BQ92526 530 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 CABS1Q96KC9 395 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 APOL5Q9BWW9 433 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 INTS2Q9H0H0 1204 aaKnown RBP7.51□□□□□ -1.21
RAB5B-201ENST00000360299 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 DPH5Q9H2P9 285 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 TRPC7Q9HCX4 862 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 HPSEQ9Y251 543 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 NHSL1Q5SYE7 1610 aa7.51□□□□□ -1.21
RAB5B-201ENST00000360299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 MYMKA6NI61 221 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 HOXA2O43364 376 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 HBP1O60381 514 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ATP2C2O75185 946 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SREBF1P36956 1147 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TFDP2Q14188 446 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 RFX6Q8HWS3 928 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 CTAGE3PQ8IX95 158 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 C10orf67Q8IYJ2 551 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SIX6OS1Q8N1H7 587 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ARHGAP24Q8N264 748 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SLC38A10Q9HBR0 1119 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 PPANQ9NQ55 473 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 IPO11Q9UI26 975 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TJP1Q07157 1748 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 LAMB4A4D0S4 1761 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 NUP188Q5SRE5 1749 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SPDYE16A6NNV3 312 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 H3BRB1 525 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 NPM3O75607 178 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 OATP04181 439 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 STX2P32856 288 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 DRAP1Q14919 205 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ARL13BQ3SXY8 428 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 SYT2Q8N9I0 419 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ARNTL2Q8WYA1 636 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TMEM143Q96AN5 459 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 WDR18Q9BV38 432 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TMEM60Q9H2L4 133 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 POLD4Q9HCU8 107 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 GRID2IPA4D2P6 1211 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8SH3BPF8 625 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TEX33O43247 280 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 KRT1P04264 644 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 PSEN2P49810 448 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ALDH5A1P51649 535 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 NR1I3Q14994 352 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 STILQ15468 1287 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TOGARAM2Q6ZUX3 1019 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 RYBPQ8N488 228 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ABHD8Q96I13 439 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 PORCNQ9H237 461 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 EPB41L5Q9HCM4 733 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 RBAKQ9NYW8 714 aaPredicted RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 CNOT8Q9UFF9 292 aaKnown RBP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 GAKO14976 1311 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 UBR2Q8IWV8 1755 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 GOLGA8CPA6NN73 597 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TJP3O95049 919 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ZRANB2O95218 330 aaKnown RBP eCLIP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 FTCDO95954 541 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 URODP06132 367 aa7.5□□□□□ -1.21
RAB5B-201ENST00000360299 TROVE2P10155 538 aaKnown RBP eCLIP7.5□□□□□ -1.21
RAB5B-201ENST00000360299 ACRP10323 421 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms