RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 RHPN2Q8IUC4 686 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 XPO6Q96QU8 1125 aaKnown RBP16.71■□□□□ 0.26
HDAC5-202ENST00000336057 AP5M1Q9H0R1 490 aa16.71■□□□□ 0.26
HDAC5-202ENST00000336057 CDH16O75309 829 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 SPAG7O75391 227 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 CNGA1P29973 690 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 RBBP5Q15291 538 aaKnown RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 VPS72Q15906 364 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 P4HA2O15460 535 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 Q3C1V9 767 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 ARL13BQ3SXY8 428 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 RAB44Q7Z6P3 723 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 DCLK2Q8N568 766 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 GJB7Q6PEY0 223 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 CPA5Q8WXQ8 436 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 ARFIP2P53365 341 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 FAM49AQ9H0Q0 323 aaPredicted RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 CARD9Q9H257 536 aa16.7■□□□□ 0.26
HDAC5-202ENST00000336057 G3BP2Q9UN86 482 aaKnown RBP16.7■□□□□ 0.26
HDAC5-202ENST00000336057 BCAR1P56945 870 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 BBS5Q8N3I7 341 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 VCPKMTQ9H867 229 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 ANKZF1Q9H8Y5 726 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 STOML1Q9UBI4 398 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 LPXNO60711 386 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 SEC24CP53992 1094 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 ROR1Q01973 937 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 HIF1AQ16665 826 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 PPWD1Q96BP3 646 aaKnown RBP16.69■□□□□ 0.26
HDAC5-202ENST00000336057 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
HDAC5-202ENST00000336057 ARL2BPQ9Y2Y0 163 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 WDR46O15213 610 aaKnown RBP16.69■□□□□ 0.26
HDAC5-202ENST00000336057 MSH4O15457 936 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 HSPA4LO95757 839 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 TTC4O95801 387 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 LONRF1Q17RB8 773 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 RBM15Q96T37 977 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC5-202ENST00000336057 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 ARHGAP20Q9P2F6 1191 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 KRT3P12035 628 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 PON1P27169 355 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 EFNA5P52803 228 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 XKR3Q5GH77 459 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 LPAR1Q92633 364 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 MXRA8Q9BRK3 442 aa16.69■□□□□ 0.26
HDAC5-202ENST00000336057 TOPORSQ9NS56 1045 aaPredicted RBP16.69■□□□□ 0.26
HDAC5-202ENST00000336057 MED24O75448 989 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 PMS1P54277 932 aaKnown RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ANKRD20A4Q4UJ75 823 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ANKRD20A8PQ5CZ79 823 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ANKRD20A2Q5SQ80 823 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 FAM102AQ5T9C2 384 aaPredicted RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ANKRD20A1Q5TYW2 823 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 CASKIN2Q8WXE0 1202 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 TRIM56Q9BRZ2 755 aaKnown RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 DBR1Q9UK59 544 aaKnown RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 PI4K2BG5E9Z4 385 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 FAM107AO95990 144 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 HSD17B3P37058 310 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 COG7P83436 770 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ART3Q13508 389 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 FBXW10Q5XX13 1052 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 ACOT2P49753 483 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 MDM2Q00987 491 aaPredicted RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 CDR2Q01850 454 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 MOXD1Q6UVY6 613 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 AGPAT3Q9NRZ7 376 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 KCND1Q9NSA2 647 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 FIS1Q9Y3D6 152 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 A0A087X0B3 334 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 SNRPFP62306 86 aaKnown RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 PTGISQ16647 500 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 EFHD1Q9BUP0 239 aa16.68■□□□□ 0.26
HDAC5-202ENST00000336057 KLHL8Q9P2G9 620 aaPredicted RBP16.68■□□□□ 0.26
HDAC5-202ENST00000336057 CIITAP33076 1130 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 P3H1Q32P28 736 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 C9orf72Q96LT7 481 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 CYTH2Q99418 400 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 FAM96AQ9H5X1 160 aa16.67■□□□□ 0.26
HDAC5-202ENST00000336057 DMGDHQ9UI17 866 aaKnown RBP16.67■□□□□ 0.26
HDAC5-202ENST00000336057 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms