RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CAND2O75155 1236 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 BMP3P12645 472 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 SOX6P35712 828 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 COX10Q12887 443 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 GID8Q9NWU2 228 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CCDC22O60826 627 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 MZF1P28698 734 aaPredicted RBP17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CNGB3Q9NQW8 809 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 SEPT3Q9UH03 358 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 POLG2Q9UHN1 485 aa17.28■□□□□ 0.36
PTCH1-201ENST00000331920 CHUKO15111 745 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 GNA15P30679 374 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 YWHAZP63104 245 aaKnown RBP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 PPP2R2AP63151 447 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 ST8SIA6P61647 398 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 IL31Q6EBC2 164 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 GLMNQ92990 594 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 EPN3Q9H201 632 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 NCKAP5LQ9HCH0 1330 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 PFKFB2O60825 505 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 PKP1Q13835 747 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 FAM102AQ5T9C2 384 aaPredicted RBP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 ALKBH5Q6P6C2 394 aaKnown RBP17.27■□□□□ 0.36
PTCH1-201ENST00000331920 P3H2Q8IVL5 708 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 TRIM48Q8IWZ4 208 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 N6AMT1Q9Y5N5 214 aa17.27■□□□□ 0.36
PTCH1-201ENST00000331920 ALDH1A2O94788 518 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 APOL1O14791 398 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 MTRF1O75570 445 aaKnown RBP17.27■□□□□ 0.35
PTCH1-201ENST00000331920 ALDH1A1P00352 501 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 KCNA3P22001 575 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 BAG6P46379 1132 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 POTEEQ6S8J3 1075 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 LAYNQ6UX15 382 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 RHOT2Q8IXI1 618 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 GALNT8Q9NY28 637 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 BLOC1S6Q9UL45 172 aa17.27■□□□□ 0.35
PTCH1-201ENST00000331920 IKBKBO14920 756 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 CUL4AQ13619 759 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 C19orf60Q96EN9 201 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 RNF14Q9UBS8 474 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 GSTM1P09488 218 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 PDIA3P30101 505 aaKnown RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 GCLMP48507 274 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 SESN2P58004 480 aaPredicted RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 TWF1Q12792 350 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 MYO10Q9HD67 2058 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 HNRNPRO43390 633 aaKnown RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 NBPF9Q3BBW0 867 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 TTC13Q8NBP0 860 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 MYBP10242 640 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 ATP6V1B1P15313 513 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 DNAJC12Q9UKB3 198 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 NFICP08651 508 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 PID1Q7Z2X4 250 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 THTPAQ9BU02 230 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 NDUFS3O75489 264 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 RALAP11233 206 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 SDC4P31431 198 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 CHI3L1P36222 383 aaPredicted RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 NCKAP1LP55160 1127 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 BTBD8Q5XKL5 378 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 CALML6Q8TD86 181 aa17.26■□□□□ 0.35
PTCH1-201ENST00000331920 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.26■□□□□ 0.35
PTCH1-201ENST00000331920 UBTFL6P0CB48 400 aaPredicted RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 C4BPBP20851 252 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 VEPH1Q14D04 833 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 EFHBQ8N7U6 833 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 C19orf18Q8NEA5 215 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 C1orf54Q8WWF1 131 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 TMA7Q9Y2S6 64 aaKnown RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 NEURL1BA8MQ27 555 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 CALB1P05937 261 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 HSMCR30P0CW71 290 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 CDC27P30260 824 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 ARSEP51690 589 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 OLFM1Q99784 485 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 C11orf70Q9BRQ4 267 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 GPC5P78333 572 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 CNKSR1Q969H4 720 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 KLHL25Q9H0H3 589 aa17.25■□□□□ 0.35
PTCH1-201ENST00000331920 FAM217BQ9NTX9 383 aaPredicted RBP17.25■□□□□ 0.35
PTCH1-201ENST00000331920 STON1Q9Y6Q2 735 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms