RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 HLA-DOAP06340 250 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DHRS4L1P0CG22 281 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 FDX1P10109 184 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 UNGP13051 313 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 CDC25CP30307 473 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 FMO5P49326 533 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 NCKAP1LP55160 1127 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PTK6Q13882 451 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SCARA3Q6AZY7 606 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 RUFY4Q6ZNE9 571 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 MICALCLQ6ZW33 695 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 TDRPQ86YL5 185 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 EGFL6Q8IUX8 553 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 CCDC50Q8IVM0 306 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SYCE1Q8N0S2 351 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 RDM1Q8NG50 284 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ROPN1BQ9BZX4 212 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 CDC42EP4Q9H3Q1 356 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 C17orf75Q9HAS0 396 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ROPN1Q9HAT0 212 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 VEZTQ9HBM0 779 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PLA2G4CQ9UP65 541 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 CNTN6Q9UQ52 1028 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ACTL7BQ9Y614 415 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PLXNB2O15031 1838 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GREB1Q4ZG55 1949 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DDTLA6NHG4 134 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 C3orf70A6NLC5 250 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 CETN3O15182 167 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PRPF4O43172 522 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-202ENST00000305866 PPP1R12BO60237 982 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ECM2O94769 699 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 CAPNS1P04632 268 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 NR2F2P24468 414 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GBP1P32455 592 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 COILP38432 576 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 RAB27AP51159 221 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GTF2BQ00403 316 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DR1Q01658 176 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ADCY2Q08462 1091 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PABPC1LQ4VXU2 614 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ANKRD20A2Q5SQ80 823 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ANKRD20A1Q5TYW2 823 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ANKRD20A3Q5VUR7 823 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 XRRA1Q6P2D8 792 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 FAM83AQ86UY5 434 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ZFPM1Q8IX07 1006 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GPATCH11Q8N954 259 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SUPT20HQ8NEM7 779 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 HELQQ8TDG4 1101 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 EPS8L1Q8TE68 723 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GPR101Q96P66 508 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 WHRNQ9P202 907 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 ADAMTS5Q9UNA0 930 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 UBIAD1Q9Y5Z9 338 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 STYXL1Q9Y6J8 313 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 FRMPD2Q68DX3 1309 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ANKRD62A6NC57 917 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SPDYE5A6NIY4 337 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 CEP104O60308 925 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 IL1BP01584 269 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GZMAP12544 262 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 HSPA6P17066 643 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 TAL1P17542 331 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 LMNB1P20700 586 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 RPL13P26373 211 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 RAPGEF1Q13905 1077 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DLGAP5Q15398 846 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PTPROQ16827 1216 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 GKAP1Q5VSY0 366 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 DAB2IPQ5VWQ8 1189 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 NAIF1Q69YI7 327 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 HIBCHQ6NVY1 386 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-202ENST00000305866 CCDC197Q8NCU1 140 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SEMA4DQ92854 862 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 PWWP2AQ96N64 755 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 RUNDC3BQ96NL0 473 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 SERPINB12Q96P63 405 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 EIF2AK1Q9BQI3 630 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 MOV10L1Q9BXT6 1211 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 R3HDM2Q9Y2K5 976 aaKnown RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 ATP8A1Q9Y2Q0 1164 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 USP15Q9Y4E8 981 aaPredicted RBP5.85□□□□□ -1.47
VPS50-202ENST00000305866 MYPNQ86TC9 1320 aa5.85□□□□□ -1.47
VPS50-202ENST00000305866 DPPA5A6NC42 116 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 NDUFB10O96000 172 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 GSRP00390 522 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 FGFR4P22455 802 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 CCND1P24385 295 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
VPS50-202ENST00000305866 NFIAQ12857 509 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 TAZQ16635 292 aa5.84□□□□□ -1.47
VPS50-202ENST00000305866 SLC4A8Q2Y0W8 1093 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms