RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SERPINB12Q96P63 405 aa14.02□□□□□ -0.16
NUP54-201ENST00000264883 GPR101Q96P66 508 aaPredicted RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 KANSL2Q9H9L4 492 aa14.02□□□□□ -0.16
NUP54-201ENST00000264883 ARMCX3Q9UH62 379 aaPredicted RBP14.02□□□□□ -0.16
NUP54-201ENST00000264883 PFASO15067 1338 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 MARCH6O60337 910 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 ATP6V1G1O75348 118 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 UCHL3P15374 230 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 MARK3P27448 753 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 MPP2Q14168 576 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 FAM47EQ6ZV65 393 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 ZNF365Q70YC5 407 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 ZNF804AQ7Z570 1209 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 TRIM42Q8IWZ5 723 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 SLC44A5Q8NCS7 719 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 GLIS3Q8NEA6 775 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 NRG4Q8WWG1 115 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 NUDT12Q9BQG2 462 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 SPATA16Q9BXB7 569 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 HDAC9Q9UKV0 1011 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 PCDHA12Q9UN75 941 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 USH1CQ9Y6N9 552 aa14.02□□□□□ -0.17
NUP54-201ENST00000264883 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 SLC16A3O15427 465 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 CALUO43852 315 aaPredicted RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 PLA2G4BP0C869 781 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 T-ENOLP0DO92 83 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 IL1R1P14778 569 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 TAC1P20366 129 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 PTGIRP43119 386 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 CLK2P49760 499 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 KPNB1Q14974 876 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 RCN1Q15293 331 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 EXOC3L4Q17RC7 722 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 CCDC25Q86WR0 208 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 SLF2Q8IX21 1173 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 SCFD1Q8WVM8 642 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 PNMA6FA0A0J9YX94 578 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 FOXO6A8MYZ6 492 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 DCTN3O75935 186 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 FAM200BP0CF97 657 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 DESP17661 470 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 STRN3Q13033 797 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 LRRC74BQ6ZQY2 392 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 C4orf50Q6ZRC1 276 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 HOMEZQ8IX15 550 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 PPFIBP2Q8ND30 876 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 C18orf8Q96DM3 657 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.01□□□□□ -0.17
NUP54-201ENST00000264883 NKIRAS1Q9NYS0 192 aa14.01□□□□□ -0.17
NUP54-201ENST00000264883 LARSQ9P2J5 1176 aaKnown RBP14.01□□□□□ -0.17
NUP54-201ENST00000264883 PODXLO00592 558 aa14□□□□□ -0.17
NUP54-201ENST00000264883 EDIL3O43854 480 aa14□□□□□ -0.17
NUP54-201ENST00000264883 UBTFL6P0CB48 400 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 NR2F2P24468 414 aa14□□□□□ -0.17
NUP54-201ENST00000264883 TNNI2P48788 182 aa14□□□□□ -0.17
NUP54-201ENST00000264883 ZNF211Q13398 564 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 GIT2Q14161 759 aa14□□□□□ -0.17
NUP54-201ENST00000264883 GSTA3Q16772 222 aa14□□□□□ -0.17
NUP54-201ENST00000264883 DPY19L2P1Q6NXN4 242 aa14□□□□□ -0.17
NUP54-201ENST00000264883 GPBP1Q86WP2 473 aa14□□□□□ -0.17
NUP54-201ENST00000264883 MAPKAPK5Q8IW41 473 aa14□□□□□ -0.17
NUP54-201ENST00000264883 HAS1Q92839 578 aa14□□□□□ -0.17
NUP54-201ENST00000264883 PDGFDQ9GZP0 370 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 TAOK3Q9H2K8 898 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CPVLQ9H3G5 476 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CD209Q9NNX6 404 aa14□□□□□ -0.17
NUP54-201ENST00000264883 PPP1R9AQ9ULJ8 1098 aa14□□□□□ -0.17
NUP54-201ENST00000264883 ZNF510Q9Y2H8 683 aa14□□□□□ -0.17
NUP54-201ENST00000264883 GMEB1Q9Y692 573 aa14□□□□□ -0.17
NUP54-201ENST00000264883 COMMD3-BMI1R4GMX3 469 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CDK5RAP2Q96SN8 1893 aa14□□□□□ -0.17
NUP54-201ENST00000264883 NCANO14594 1321 aa14□□□□□ -0.17
NUP54-201ENST00000264883 USP17L5A8MUK1 530 aa14□□□□□ -0.17
NUP54-201ENST00000264883 PDXKO00764 312 aa14□□□□□ -0.17
NUP54-201ENST00000264883 TRAFD1O14545 582 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 PHF2O75151 1096 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CBX6O95503 412 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CYP1A1P04798 512 aaPredicted RBP14□□□□□ -0.17
NUP54-201ENST00000264883 ACTN1P12814 892 aa14□□□□□ -0.17
NUP54-201ENST00000264883 XRCC5P13010 732 aaKnown RBP14□□□□□ -0.17
NUP54-201ENST00000264883 RPL13P26373 211 aaKnown RBP14□□□□□ -0.17
NUP54-201ENST00000264883 PTPN4P29074 926 aa14□□□□□ -0.17
NUP54-201ENST00000264883 FOXN2P32314 431 aa14□□□□□ -0.17
NUP54-201ENST00000264883 SLC34A1Q06495 639 aa14□□□□□ -0.17
NUP54-201ENST00000264883 LSAMPQ13449 338 aa14□□□□□ -0.17
NUP54-201ENST00000264883 RFWD3Q6PCD5 774 aa14□□□□□ -0.17
NUP54-201ENST00000264883 CEP128Q6ZU80 1094 aa14□□□□□ -0.17
NUP54-201ENST00000264883 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms