RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SNX25Q9H3E2 840 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM45Q9H8W5 580 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ACTR5Q9H9F9 607 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ANKEF1Q9NU02 776 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CEP72Q9P209 647 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 FAM8A1Q9UBU6 413 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 TRIM10Q9UDY6 481 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 DDX25Q9UHL0 483 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 STX8Q9UNK0 236 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 MYPNQ86TC9 1320 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CDK12Q9NYV4 1490 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 C15orf38-AP3S2A0A0A6YYH1 394 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ESYT3A0FGR9 886 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 LRRC10BA6NIK2 292 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 PDLIM1O00151 329 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ASAP2O43150 1006 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 SHOX2O60902 331 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CRTAPO75718 401 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 PDE5AO76074 875 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 AARSP49588 968 aaKnown RBP eCLIP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 EPHB1P54762 984 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 GNG11P61952 73 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 PPARDQ03181 441 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 PTK2Q05397 1052 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 MTMR3Q13615 1198 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ANGPT1Q15389 498 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CYTH1Q15438 398 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 KCTD21Q4G0X4 260 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CLVS2Q5SYC1 327 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 TMEM164Q5U3C3 297 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 PRPF40BQ6NWY9 871 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ENOSF1Q7L5Y1 443 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ZBTB46Q86UZ6 589 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 GRK7Q8WTQ7 553 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 POMGNT1Q8WZA1 660 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 IRGQQ8WZA9 623 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 C7orf25Q9BPX7 421 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 LPIN3Q9BQK8 851 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ESYT1Q9BSJ8 1104 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC106Q9BWC9 280 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 NT5C3AQ9H0P0 336 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 KIAA1586Q9HCI6 787 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ZFATQ9P243 1243 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 CIDEBQ9UHD4 219 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 QSER1Q2KHR3 1735 aa4.14□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF335Q9H4Z2 1342 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 H3BRJ5 948 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PSMD11O00231 422 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SCAMP1O15126 338 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MAPK13O15264 365 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MEFVO15553 781 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ARHGAP6O43182 974 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ATP9AO75110 1047 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CPA1P15085 419 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 FUT4P22083 530 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 HMOX2P30519 316 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SERPINB6P35237 376 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 HNF4AP41235 474 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PHKA1P46020 1223 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GPC3P51654 580 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 STAT2P52630 851 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 BEX3Q00994 111 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 EXOSC10Q01780 885 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ARID5BQ14865 1188 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SLC9A5Q14940 896 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NUTM2DQ5VT03 806 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CYB5RLQ6IPT4 315 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MZT2BQ6NZ67 158 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 GGT6Q6P531 493 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CCDC149Q6ZUS6 474 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 RNF169Q8NCN4 708 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ZNF540Q8NDQ6 660 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 BCAS4Q8TDM0 211 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PRPF31Q8WWY3 499 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 HERVK_113Q902F9 699 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 C8orf76Q96K31 380 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 ZC3H10Q96K80 434 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 UPF3BQ9BZI7 483 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CRLF2Q9HC73 371 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 OLA1Q9NTK5 396 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 IFT80Q9P2H3 777 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NFKBIL1Q9UBC1 381 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 SPATA2Q9UM82 520 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CAB39Q9Y376 341 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 IPPQ9Y573 584 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PHRF1Q9P1Y6 1649 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 NUDT19A8MXV4 375 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 IGF2BP3O00425 579 aaKnown RBP eCLIP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 AP3D1O14617 1153 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 MCF2LO15068 1137 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PRPF3O43395 683 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 TXNL1O43396 289 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 KERAO60938 352 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 STARD3NLO95772 234 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 DNTTP04053 509 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 FYNP06241 537 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 KRT16P08779 473 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 CLTBP09497 229 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 THOP1P52888 689 aa4.13□□□□□ -1.75
R3HDM1-220ENST00000628915 PTPN5P54829 565 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms