RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SCN4AP35499 1836 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 ZNF233A6NK53 670 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 ABCB4P21439 1286 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 GLRA2P23416 452 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 LIG4P49917 911 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 FAM193AP78312 1265 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 SV2AQ7L0J3 742 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 ACTRT1Q8TDG2 376 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 HELQQ8TDG4 1101 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 FAM213AQ9BRX8 229 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 SELENOOQ9BVL4 669 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 ISCUQ9H1K1 167 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 TMEM59LQ9UK28 342 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 SIP14410 1827 aa21.29■■□□□ 1
PCDHB11-202ENST00000624887 H3BQF6 201 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 EXTL3O43909 919 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 RFC5P40937 340 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 SLC7A5Q01650 507 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 STRN3Q13033 797 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 PPIL2Q13356 520 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 TARBP2Q15633 366 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 TAF3Q5VWG9 929 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 METTL7BQ6UX53 244 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 MOB2Q70IA6 237 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 RPUSD2Q8IZ73 545 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 TAS1R2Q8TE23 839 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 EPS8L1Q8TE68 723 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 AFAP1L1Q8TED9 768 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 NT5C1BQ96P26 610 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 THAP2Q9H0W7 228 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 ACBD3Q9H3P7 528 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 NRBP2Q9NSY0 501 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 KIAA0391O15091 583 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 BUB1BO60566 1050 aaPredicted RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 PIGRP01833 764 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 TNFRSF8P28908 595 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 USP8P40818 1118 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 PRPF4BQ13523 1007 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 FAM160B1Q5W0V3 765 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 METTL13Q8N6R0 699 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 AENQ8WTP8 325 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 ARHGEF26Q96DR7 871 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 HES6Q96HZ4 224 aa21.28■■□□□ 1
PCDHB11-202ENST00000624887 NOCTQ9UK39 431 aaKnown RBP21.28■■□□□ 1
PCDHB11-202ENST00000624887 POLR3GO15318 223 aaPredicted RBP21.27■■□□□ 1
PCDHB11-202ENST00000624887 SGPL1O95470 568 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 DLATP10515 647 aaKnown RBP21.27■■□□□ 1
PCDHB11-202ENST00000624887 COPB2P35606 906 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 TNNT3P45378 269 aaPredicted RBP21.27■■□□□ 1
PCDHB11-202ENST00000624887 STAT5BP51692 787 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 CLDN10P78369 228 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 GSPT2Q8IYD1 628 aaKnown RBP21.27■■□□□ 1
PCDHB11-202ENST00000624887 DEPTORQ8TB45 409 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 SEPT1Q8WYJ6 367 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 MPHOSPH6Q99547 160 aaKnown RBP21.27■■□□□ 1
PCDHB11-202ENST00000624887 R3HDMLQ9H3Y0 253 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 AMFRQ9UKV5 643 aa21.27■■□□□ 1
PCDHB11-202ENST00000624887 TULP1O00294 542 aaPredicted RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 GGPS1O95749 300 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 HADHBP55084 474 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 MRPS25P82663 173 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 MOGSQ13724 837 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 TCEAL1Q15170 157 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 NOP9Q86U38 636 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 RHOT2Q8IXI1 618 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 PSPC1Q8WXF1 523 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 CALR3Q96L12 384 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 TXNRD2Q9NNW7 524 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 ZCCHC17Q9NP64 241 aaKnown RBP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 RBPJLQ9UBG7 517 aa21.27■□□□□ 0.99
PCDHB11-202ENST00000624887 LRRIQ4A6NIV6 560 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 K7ERI5 159 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 CYP26A1O43174 497 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 CEP104O60308 925 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 ZC3H11AO75152 810 aaKnown RBP eCLIP21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 FTLP02792 175 aaPredicted RBP21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 CHRNB2P17787 502 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 RNASE9P60153 205 aaKnown RBP21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 TTLL12Q14166 644 aaPredicted RBP21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 PSMD6Q15008 389 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 PTPROQ16827 1216 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 C15orf39Q6ZRI6 1047 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 FGD4Q96M96 766 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 HINFPQ9BQA5 517 aa21.26■□□□□ 0.99
PCDHB11-202ENST00000624887 SOCS7O14512 581 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 RTN2O75298 545 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 GZMAP12544 262 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 TCF7P36402 384 aaPredicted RBP21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 TNNC1P63316 161 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 SLFN12LQ6IEE8 588 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 EEPD1Q7L9B9 569 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 RASGEF1CQ8N431 466 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 AGO2Q9UKV8 859 aaKnown RBP21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 HPCAL4Q9UM19 191 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 PGRMC1O00264 195 aaKnown RBP21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 Q3C1V9 767 aa21.25■□□□□ 0.99
PCDHB11-202ENST00000624887 KCNV1Q6PIU1 500 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms