RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 HES2Q9Y543 173 aa23.64■■□□□ 1.37
NECAB3-221ENST00000607055 IPPQ9Y573 584 aa23.64■■□□□ 1.37
NECAB3-221ENST00000607055 STYXL1Q9Y6J8 313 aa23.64■■□□□ 1.37
NECAB3-221ENST00000607055 A0A0B4J269 797 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 PDXKO00764 312 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 CEP290O15078 2479 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 SKIP12755 728 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 FAM189BP81408 668 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 DEFB103AP81534 67 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 ZSCAN23Q3MJ62 389 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 MICAL3Q7RTP6 2002 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 THNSL1Q8IYQ7 743 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 SMG8Q8ND04 991 aaKnown RBP23.63■■□□□ 1.37
NECAB3-221ENST00000607055 GOLGA5Q8TBA6 731 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 DHTKD1Q96HY7 919 aaPredicted RBP23.63■■□□□ 1.37
NECAB3-221ENST00000607055 APOL6Q9BWW8 343 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 NXF3Q9H4D5 531 aaKnown RBP23.63■■□□□ 1.37
NECAB3-221ENST00000607055 PCIF1Q9H4Z3 704 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 CTNND2Q9UQB3 1225 aa23.63■■□□□ 1.37
NECAB3-221ENST00000607055 CALUO43852 315 aaPredicted RBP23.62■■□□□ 1.37
NECAB3-221ENST00000607055 GARTP22102 1010 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 OSTNP61366 133 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 SNRPFP62306 86 aaKnown RBP23.62■■□□□ 1.37
NECAB3-221ENST00000607055 TYRO3Q06418 890 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 SHHQ15465 462 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 STX1AQ16623 288 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 SEZ6Q53EL9 994 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 CEP120Q8N960 986 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 NELFBQ8WX92 580 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 P2RX5Q93086 422 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 RNPC3Q96LT9 517 aaKnown RBP23.62■■□□□ 1.37
NECAB3-221ENST00000607055 CGNQ9P2M7 1197 aaKnown RBP23.62■■□□□ 1.37
NECAB3-221ENST00000607055 AGO2Q9UKV8 859 aaKnown RBP23.62■■□□□ 1.37
NECAB3-221ENST00000607055 LRFN2Q9ULH4 789 aa23.62■■□□□ 1.37
NECAB3-221ENST00000607055 PDE4DIPQ5VU43 2346 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 ZNF623O75123 536 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 UPP2O95045 317 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 ITGA4P13612 1032 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 ATF7P17544 494 aaPredicted RBP23.61■■□□□ 1.37
NECAB3-221ENST00000607055 CCNE1P24864 410 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 CYP2J2P51589 502 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 PMS1P54277 932 aaKnown RBP23.61■■□□□ 1.37
NECAB3-221ENST00000607055 CENPPQ6IPU0 288 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 MRPL10Q7Z7H8 261 aaKnown RBP23.61■■□□□ 1.37
NECAB3-221ENST00000607055 NOC3LQ8WTT2 800 aaKnown RBP23.61■■□□□ 1.37
NECAB3-221ENST00000607055 LPPQ93052 612 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 PGBD4Q96DM1 585 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 SAAL1Q96ER3 474 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 TSG101Q99816 390 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 GZF1Q9H116 711 aaPredicted RBP23.61■■□□□ 1.37
NECAB3-221ENST00000607055 RNF39Q9H2S5 420 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 ANO10Q9NW15 660 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 TMEM161AQ9NX61 479 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 SNTG2Q9NY99 539 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 DACH1Q9UI36 760 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 TRAF3IP3Q9Y228 551 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 PCDHB7Q9Y5E2 793 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 SLC4A7Q9Y6M7 1214 aa23.61■■□□□ 1.37
NECAB3-221ENST00000607055 TRIM49BA6NDI0 452 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 OGTO15294 1046 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 GRM5P41594 1212 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 STX17P56962 302 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 PAK1Q13153 545 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 ZCWPW2Q504Y3 356 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 ZBTB41Q5SVQ8 909 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 ANKRD40Q6AI12 368 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 TMCO2Q7Z6W1 182 aaPredicted RBP23.6■■□□□ 1.37
NECAB3-221ENST00000607055 ZNF598Q86UK7 904 aaKnown RBP23.6■■□□□ 1.37
NECAB3-221ENST00000607055 NPAS4Q8IUM7 802 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 HACE1Q8IYU2 909 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 CCDC94Q9BW85 323 aaPredicted RBP23.6■■□□□ 1.37
NECAB3-221ENST00000607055 ELAC1Q9H777 363 aaKnown RBP23.6■■□□□ 1.37
NECAB3-221ENST00000607055 HSPBP1Q9NZL4 362 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 PARP2Q9UGN5 583 aa23.6■■□□□ 1.37
NECAB3-221ENST00000607055 GOLGA8IPA6NC78 632 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 GOLGA8JA6NMD2 632 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 MEIS3P2A8K0S8 358 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 EOMESO95936 686 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 NR3C1P04150 777 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 STAG3L1P0CL83 205 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 AKAP5P24588 427 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 BMP8BP34820 402 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 RASIP1Q5U651 963 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 FAM117BQ6P1L5 589 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 CHRDL2Q6WN34 429 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 C12orf56Q8IXR9 622 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 TMEM192Q8IY95 271 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 ZSWIM2Q8NEG5 633 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 FAM213AQ9BRX8 229 aa23.59■■□□□ 1.37
NECAB3-221ENST00000607055 RNF216Q9NWF9 866 aaPredicted RBP23.59■■□□□ 1.37
NECAB3-221ENST00000607055 TNRC18O15417 2968 aaPredicted RBP23.59■■□□□ 1.37
NECAB3-221ENST00000607055 FAM189A1O60320 539 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 CCDC192P0DO97 292 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 FGFR1P11362 822 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 TNFSF9P41273 254 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 ACOT2P49753 483 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 LRRC63Q05C16 580 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 TOP1MTQ969P6 601 aa23.58■■□□□ 1.37
NECAB3-221ENST00000607055 BICDL2A1A5D9 508 aa23.57■■□□□ 1.36
NECAB3-221ENST00000607055 KIAA0391O15091 583 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms