RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ZNF233A6NK53 670 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 OGTO15294 1046 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 ADCY5O95622 1261 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 MCF2P10911 925 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 CASP4P49662 377 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 ZNF75DP51815 510 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 ATN1P54259 1190 aaPredicted RBP20.25■□□□□ 0.83
SSBP4-212ENST00000601919 ENPEPQ07075 957 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 SNRNP35Q16560 246 aaKnown RBP20.25■□□□□ 0.83
SSBP4-212ENST00000601919 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 TRIM59Q8IWR1 403 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 TMEM40Q8WWA1 233 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 ZBTB45Q96K62 511 aaPredicted RBP20.25■□□□□ 0.83
SSBP4-212ENST00000601919 PDZD7Q9H5P4 517 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 TAB2Q9NYJ8 693 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 USP20Q9Y2K6 914 aa20.25■□□□□ 0.83
SSBP4-212ENST00000601919 A0A1B0GTH6 734 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 TTLL13PA6NNM8 815 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 PES1O00541 588 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 PITPNM1O00562 1244 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 VWA3BQ502W6 1294 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 ZNF618Q5T7W0 954 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 ZBTB33Q86T24 672 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 RDH13Q8NBN7 331 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 DIS3LQ8TF46 1054 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 SAAL1Q96ER3 474 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 MRFAP1L1Q96HT8 127 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 CPB2Q96IY4 423 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 PAWRQ96IZ0 340 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 FAM213AQ9BRX8 229 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 XPO4Q9C0E2 1151 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 VPS16Q9H269 839 aa20.24■□□□□ 0.83
SSBP4-212ENST00000601919 NOC2LQ9Y3T9 749 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 KIAA0100Q14667 2235 aaKnown RBP20.24■□□□□ 0.83
SSBP4-212ENST00000601919 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 ABLIM1O14639 778 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 STX10O60499 249 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
SSBP4-212ENST00000601919 SELPP16109 830 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 FGFR4P22455 802 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
SSBP4-212ENST00000601919 BFSP1Q12934 665 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 PAK2Q13177 524 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 FBXO47Q5MNV8 452 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 FKBP15Q5T1M5 1219 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 SLC27A1Q6PCB7 646 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 APTXQ7Z2E3 356 aaKnown RBP20.23■□□□□ 0.83
SSBP4-212ENST00000601919 FAM228AQ86W67 206 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 CHST12Q9NRB3 414 aa20.23■□□□□ 0.83
SSBP4-212ENST00000601919 PIN4Q9Y237 131 aaKnown RBP20.23■□□□□ 0.83
SSBP4-212ENST00000601919 AP5Z1O43299 807 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 PARNO95453 639 aaKnown RBP20.22■□□□□ 0.83
SSBP4-212ENST00000601919 HOXA11P31270 313 aaPredicted RBP20.22■□□□□ 0.83
SSBP4-212ENST00000601919 NR1I3Q14994 352 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 TRIM60Q495X7 471 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 TCERG1LQ5VWI1 586 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 EEF1DP3Q658K8 133 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 LRRC8DQ7L1W4 858 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.22■□□□□ 0.83
SSBP4-212ENST00000601919 CBWD2Q8IUF1 395 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 TRIM6Q9C030 488 aaPredicted RBP20.22■□□□□ 0.83
SSBP4-212ENST00000601919 CDT1Q9H211 546 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 NDST4Q9H3R1 872 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 RTN4Q9NQC3 1192 aaKnown RBP20.22■□□□□ 0.83
SSBP4-212ENST00000601919 ST3GAL5Q9UNP4 418 aa20.22■□□□□ 0.83
SSBP4-212ENST00000601919 CDC25BP30305 580 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 ACOT2P49753 483 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 VAMP7P51809 220 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 UBXN1Q04323 297 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 TLE2Q04725 743 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 CYP24A1Q07973 514 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
SSBP4-212ENST00000601919 SURF1Q15526 300 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 DCAF17Q5H9S7 520 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-212ENST00000601919 NAP1L5Q96NT1 182 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-212ENST00000601919 HAPLN2Q9GZV7 340 aa20.21■□□□□ 0.83
SSBP4-212ENST00000601919 RBAKQ9NYW8 714 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-212ENST00000601919 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
SSBP4-212ENST00000601919 AFPP02771 609 aaKnown RBP20.2■□□□□ 0.82
SSBP4-212ENST00000601919 CLTAP09496 248 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 GHRP10912 638 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 ZSCAN20P17040 1043 aaPredicted RBP20.2■□□□□ 0.82
SSBP4-212ENST00000601919 KCNH2Q12809 1159 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 LPIN1Q14693 890 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 MIIPQ5JXC2 388 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 THNSL1Q8IYQ7 743 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 FNBP1Q96RU3 617 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 CCDC94Q9BW85 323 aaPredicted RBP20.2■□□□□ 0.82
SSBP4-212ENST00000601919 ERVK-5Q9HDB9 667 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 ATP11BQ9Y2G3 1177 aa20.2■□□□□ 0.82
SSBP4-212ENST00000601919 NPTXRO95502 500 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 ADRB2P07550 413 aa20.19■□□□□ 0.82
SSBP4-212ENST00000601919 MCCD1P59942 119 aaPredicted RBP20.19■□□□□ 0.82
SSBP4-212ENST00000601919 FAAP100Q0VG06 881 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms