RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SSBP3Q9BWW4 388 aaPredicted RBP4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 OSBPL6Q9BZF3 934 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PCDH12Q9NPG4 1184 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 DNAI1Q9UI46 699 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PCDHB6Q9Y5E3 794 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 COL4A3BPQ9Y5P4 624 aa4.9□□□□□ -1.63
CKS1BP3-201ENST00000600888 PIK3C2GO75747 1445 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 MST1RQ04912 1400 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ASXL1Q8IXJ9 1541 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 MATN2O00339 956 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 DAPK3O43293 454 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ATF3P18847 181 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDK11BP21127 795 aaKnown RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPR15P49685 360 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 SCAND1P57086 179 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 FSCN1Q16658 493 aaKnown RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 MAN2A1Q16706 1144 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 UGT8Q16880 541 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 OR14K1Q8NGZ2 314 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ZCRB1Q8TBF4 217 aaKnown RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 LMBR1Q8WVP7 490 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 GAB3Q8WWW8 586 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 CFHR4Q92496 578 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 EAF2Q96CJ1 260 aaPredicted RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ACAP3Q96P50 834 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 LRRC37BQ96QE4 947 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 PUS7LQ9H0K6 701 aaKnown RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 MEGF9Q9H1U4 602 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 PRDM12Q9H4Q4 367 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLC5A4Q9NY91 659 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 PUF60Q9UHX1 559 aaKnown RBP4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 PRSS50Q9UI38 385 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDC42BPGQ6DT37 1551 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ADGRF5Q8IZF2 1346 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 ABCC11Q96J66 1382 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 KIAA1210Q9ULL0 1709 aa4.89□□□□□ -1.63
CKS1BP3-201ENST00000600888 RGPD8O14715 1765 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPR42O15529 346 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 FSBPO95073 299 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 LPLP06858 475 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 CELA3BP08861 270 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 SYN1P17600 705 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 CR2P20023 1033 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 ENPP1P22413 925 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 CDKN1CP49918 316 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 ADCY7P51828 1080 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 ATP2C1P98194 919 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 TRIM25Q14258 630 aaKnown RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 ACAP1Q15027 740 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 PTPROQ16827 1216 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 CCDC178Q5BJE1 867 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 CLEC14AQ86T13 490 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 TAX1BP1Q86VP1 789 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLC41A1Q8IVJ1 513 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 PLA2G15Q8NCC3 412 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 PPP1R14CQ8TAE6 165 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 GCDHQ92947 438 aaPredicted RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 GNRHR2Q96P88 292 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 DPYSL5Q9BPU6 564 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 BRINP2Q9C0B6 783 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLC6A15Q9H2J7 730 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 KCTD10Q9H3F6 313 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 C12orf65Q9H3J6 166 aaKnown RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 C14orf93Q9H972 538 aaKnown RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 C14orf119Q9NWQ9 140 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 OAZ3Q9UMX2 235 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 RBM8AQ9Y5S9 174 aaKnown RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 FMN2Q9NZ56 1722 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 LRPPRCP42704 1394 aaKnown RBP4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 JCADQ9P266 1359 aa4.88□□□□□ -1.63
CKS1BP3-201ENST00000600888 MARF1Q9Y4F3 1742 aaKnown RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 PMS2P1A4D2B8 440 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 K7ESF4 209 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 XPAP23025 273 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 LGALS4P56470 323 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 EVA1CP58658 441 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 ERVK-21P61565 698 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 CD69Q07108 199 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 PPARAQ07869 468 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 BRINP3Q76B58 766 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 NECAB2Q7Z6G3 386 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 CIR1Q86X95 450 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 CNTD1Q8N815 330 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 PRPF38AQ8NAV1 312 aaKnown RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 OR14C36Q8NHC7 312 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 SLC7A6OSQ96CW6 309 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 GPATCH3Q96I76 525 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 ORAI2Q96SN7 254 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 FDXACB1Q9BRP7 624 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 TRIM8Q9BZR9 551 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 EVLQ9UI08 416 aaPredicted RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 CNOT11Q9UKZ1 510 aaKnown RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 EDARQ9UNE0 448 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 SPATA31A6Q5VVP1 1343 aa4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 YTHDC2Q9H6S0 1430 aaKnown RBP4.87□□□□□ -1.63
CKS1BP3-201ENST00000600888 C1orf167Q5SNV9 1468 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms