RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 GET4Q7L5D6 327 aaPredicted RBP12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 TEX2Q8IWB9 1127 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 REXO1Q8N1G1 1221 aaKnown RBP12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 DAGLBQ8NCG7 672 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 DNAJB3Q8WWF6 145 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 TMEM169Q96HH4 297 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 C1orf112Q9NSG2 853 aa12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 ZFP37Q9Y6Q3 630 aaPredicted RBP12.96□□□□□ -0.33
CAPNS1-209ENST00000590049 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.34
CAPNS1-209ENST00000590049 SPDYE3A6NKU9 549 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 GCOM1H8Y6P7 765 aaPredicted RBP12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 WISP1O95388 367 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 CFBP00751 764 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 POLR2MP0CAP2 368 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 CCR10P46092 362 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 IER5Q5VY09 327 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 SLC24A5Q71RS6 500 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 CACNA2D4Q7Z3S7 1137 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 CHCHD4Q8N4Q1 142 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 JADE2Q9NQC1 790 aa12.95□□□□□ -0.34
CAPNS1-209ENST00000590049 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 DENND3A2RUS2 1198 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 GOLGA6L22H0YM25 854 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 U2AF2P26368 475 aaKnown RBP eCLIP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 KLRC2P26717 231 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 KRT85P78386 507 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 RESTQ13127 1097 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 FOXD4L6Q3SYB3 417 aaPredicted RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 ELMSAN1Q6PJG2 1045 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 FOXD4L3Q6VB84 417 aaPredicted RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 TAAR1Q96RJ0 339 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 RMDN3Q96TC7 470 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 TMEM9BQ9NQ34 198 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 TMEM161AQ9NX61 479 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 MAP3K20Q9NYL2 800 aaKnown RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 NDRG2Q9UN36 371 aaKnown RBP12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
CAPNS1-209ENST00000590049 C9IYK1 514 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 M0QZ92 97 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 INPPL1O15357 1258 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 HOXA2O43364 376 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 CFHR1Q03591 330 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 NR5A1Q13285 461 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 RILPL1Q5EBL4 403 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 ATL3Q6DD88 541 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 MTSS1LQ765P7 747 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 CASD1Q96PB1 797 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 ADAM2Q99965 735 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 MAN1C1Q9NR34 630 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 TUBE1Q9UJT0 475 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 TRPV2Q9Y5S1 764 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 CREBBPQ92793 2442 aa12.93□□□□□ -0.34
CAPNS1-209ENST00000590049 PYCARD-AS1I3L0S3 204 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 MGEA5O60502 916 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 PAPSS2O95340 614 aaPredicted RBP12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 UBA1P22314 1058 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 NFX1Q12986 1120 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 UBE2SQ16763 222 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 ARHGEF16Q5VV41 709 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 ABI1Q8IZP0 508 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 MAF1Q9H063 256 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 ELAC1Q9H777 363 aaKnown RBP12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 PIDD1Q9HB75 910 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 DPP7Q9UHL4 492 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 SPAG17Q6Q759 2223 aa12.92□□□□□ -0.34
CAPNS1-209ENST00000590049 SPAARA0A1B0GVQ0 90 aa12.91□□□□□ -0.34
CAPNS1-209ENST00000590049 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms