RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MCL1Q07820 350 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PPP3CAQ08209 521 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PSMD6Q15008 389 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 AMHR2Q16671 573 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 GNASQ5JWF2 1037 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 ATF7IP2Q5U623 682 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 TRIM65Q6PJ69 517 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 WDR59Q6PJI9 974 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 RAD9BQ6WBX8 426 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 CCAR2Q8N163 923 aaKnown RBP12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PPP1R13LQ8WUF5 828 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 ZNF296Q8WUU4 475 aaPredicted RBP12.4□□□□□ -0.42
SMAD4-205ENST00000588745 NLRP7Q8WX94 980 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 SCLT1Q96NL6 688 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PPP1R16BQ96T49 567 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 INTS2Q9H0H0 1204 aaKnown RBP12.4□□□□□ -0.42
SMAD4-205ENST00000588745 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
SMAD4-205ENST00000588745 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 PLAGL2Q9UPG8 496 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.42
SMAD4-205ENST00000588745 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 B4GALT5O43286 388 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CCP110O43303 1012 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 FAM189A1O60320 539 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 GNAT1P11488 350 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 HARSP12081 509 aaKnown RBP12.39□□□□□ -0.43
SMAD4-205ENST00000588745 ACTN1P12814 892 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 UCHL3P15374 230 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-205ENST00000588745 GTF2H1P32780 548 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 GCLMP48507 274 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 PRMT2P55345 433 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CDK17Q00537 523 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CETN1Q12798 172 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 HIC1Q14526 733 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 MTF1Q14872 753 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 TMEM132AQ24JP5 1023 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 ZNF568Q3ZCX4 644 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 EPC2Q52LR7 807 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 KRT39Q6A163 491 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CRELD2Q6UXH1 353 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-205ENST00000588745 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 RRAGAQ7L523 313 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 SRGAP1Q7Z6B7 1085 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 BRSK2Q8IWQ3 736 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 C7orf31Q8N865 590 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 CCDC127Q96BQ5 260 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 TMEM117Q9H0C3 514 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 FAM49AQ9H0Q0 323 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-205ENST00000588745 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 PTPRHQ9HD43 1115 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-205ENST00000588745 HDAC6Q9UBN7 1215 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 TNFSF13BQ9Y275 285 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 FHOD1Q9Y613 1164 aa12.39□□□□□ -0.43
SMAD4-205ENST00000588745 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 OGTO15294 1046 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 TREHO43280 583 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 ZSCAN12O43309 604 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 DLATP10515 647 aaKnown RBP12.38□□□□□ -0.43
SMAD4-205ENST00000588745 RFX1P22670 979 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 ACOT2P49753 483 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 CDC42EP1Q00587 391 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 CXCL17Q6UXB2 119 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 SYN2Q92777 582 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-205ENST00000588745 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 CHP1Q99653 195 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 ADAMTS10Q9H324 1103 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 TOPORSQ9NS56 1045 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-205ENST00000588745 APEX2Q9UBZ4 518 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
SMAD4-205ENST00000588745 MYO6Q9UM54 1294 aa12.38□□□□□ -0.43
SMAD4-205ENST00000588745 TSPAN1O60635 241 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 GPR32O75388 356 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 ERLIN2O94905 339 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 INHAP05111 366 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 CLDN10P78369 228 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 MAP2K1Q02750 393 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-205ENST00000588745 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 KIZQ2M2Z5 673 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 SFMBT2Q5VUG0 894 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 EEF1DP3Q658K8 133 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 LMO3Q8TAP4 145 aa12.37□□□□□ -0.43
SMAD4-205ENST00000588745 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms