RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 PROZP22891 400 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 STAT6P42226 847 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 RNASELQ05823 741 aaKnown RBP22.12■■□□□ 1.13
SS18-218ENST00000581021 HYAL1Q12794 435 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 BECN1Q14457 450 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 COL19A1Q14993 1142 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 CSPP1Q1MSJ5 1256 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 CEP120Q8N960 986 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 URGCPQ8TCY9 931 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 KCNG4Q8TDN1 519 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 MRPS27Q92552 414 aaKnown RBP22.12■■□□□ 1.13
SS18-218ENST00000581021 DNAJC19Q96DA6 116 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 MRPL4Q9BYD3 311 aaKnown RBP22.12■■□□□ 1.13
SS18-218ENST00000581021 CDT1Q9H211 546 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 PARVGQ9HBI0 331 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 UBN1Q9NPG3 1134 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 RCOR1Q9UKL0 485 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 GIT1Q9Y2X7 761 aa22.12■■□□□ 1.13
SS18-218ENST00000581021 F8W810 466 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 RECQL4O94761 1208 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 FAM13AO94988 1023 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 KRT18P05783 430 aaKnown RBP22.11■■□□□ 1.13
SS18-218ENST00000581021 PPM1AP35813 382 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 UBE3AQ05086 875 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 DSC1Q08554 894 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 ATL3Q6DD88 541 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 CCDC73Q6ZRK6 1079 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 DYMQ7RTS9 669 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 MYCT1Q8N699 235 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 KCNN1Q92952 543 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 ZBTB45Q96K62 511 aaPredicted RBP22.11■■□□□ 1.13
SS18-218ENST00000581021 TLR9Q9NR96 1032 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 LARSQ9P2J5 1176 aaKnown RBP22.11■■□□□ 1.13
SS18-218ENST00000581021 PARP2Q9UGN5 583 aa22.11■■□□□ 1.13
SS18-218ENST00000581021 PTGESO14684 152 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 MEFVO15553 781 aaPredicted RBP22.1■■□□□ 1.13
SS18-218ENST00000581021 ME1P48163 572 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 DCAF4L1Q3SXM0 396 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 HAUS6Q7Z4H7 955 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 COLGALT2Q8IYK4 626 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 DDX12PQ92771 950 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 IGSF21Q96ID5 467 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 HAPLN2Q9GZV7 340 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 MARCH5Q9NX47 278 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 CACNG4Q9UBN1 327 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 LZTS1Q9Y250 596 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 ZMYM2Q9UBW7 1377 aa22.1■■□□□ 1.13
SS18-218ENST00000581021 TBCAO75347 108 aaKnown RBP22.09■■□□□ 1.13
SS18-218ENST00000581021 NMT1P30419 496 aaKnown RBP22.09■■□□□ 1.13
SS18-218ENST00000581021 ALDH7A1P49419 539 aaKnown RBP22.09■■□□□ 1.13
SS18-218ENST00000581021 SMTNP53814 917 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 ZNF568Q3ZCX4 644 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 ZBTB33Q86T24 672 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 SFR1Q86XK3 245 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 HACE1Q8IYU2 909 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 LEO1Q8WVC0 666 aaPredicted RBP22.09■■□□□ 1.13
SS18-218ENST00000581021 STAMQ92783 540 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 HLA-CQ95604 372 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 ADPGKQ9BRR6 497 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 ZHX3Q9H4I2 956 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 UBE2ZQ9H832 354 aaPredicted RBP22.09■■□□□ 1.13
SS18-218ENST00000581021 KANSL3Q9P2N6 904 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 CFAP45Q9UL16 551 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 GDAQ9Y2T3 454 aa22.09■■□□□ 1.13
SS18-218ENST00000581021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.08■■□□□ 1.13
SS18-218ENST00000581021 K7ENM7 598 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 LINC01565O15544 149 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 TRAK2O60296 914 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 KCNQ1P51787 676 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 NAB2Q15742 525 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 RESP18Q5W5W9 173 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 SV2BQ7L1I2 683 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 TCF25Q9BQ70 676 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 TMEM175Q9BSA9 504 aa22.08■■□□□ 1.13
SS18-218ENST00000581021 HIDE1A8MVS5 230 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 NRP1O14786 923 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 LTBRP36941 435 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 CTC1Q2NKJ3 1217 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 ZC2HC1CQ53FD0 456 aaPredicted RBP22.07■■□□□ 1.12
SS18-218ENST00000581021 PLPP4Q5VZY2 271 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 SLC39A4Q6P5W5 647 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 MPZL3Q6UWV2 235 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 ATXN2LQ8WWM7 1075 aaKnown RBP22.07■■□□□ 1.12
SS18-218ENST00000581021 RABGGTAQ92696 567 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 DHX58Q96C10 678 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 FGFBP2Q9BYJ0 223 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 IKZF4Q9H2S9 585 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 ANKFY1Q9P2R3 1169 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 TBX20Q9UMR3 447 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 PRG3Q9Y2Y8 225 aaPredicted RBP22.07■■□□□ 1.12
SS18-218ENST00000581021 TTC28Q96AY4 2481 aa22.07■■□□□ 1.12
SS18-218ENST00000581021 TDRD15B5MCY1 1934 aaKnown RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 FRMD3A2A2Y4 597 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 HARSP12081 509 aaKnown RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 GRM5P41594 1212 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 NRIP1P48552 1158 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 OSTNP61366 133 aa22.06■■□□□ 1.12
SS18-218ENST00000581021 RBM10P98175 930 aaKnown RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 DLX2Q07687 328 aaPredicted RBP22.06■■□□□ 1.12
SS18-218ENST00000581021 GRIK3Q13003 919 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms