RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MROH6A6NGR9 719 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 H3BML4 177 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ALDH2P05091 517 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 INHBBP09529 407 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 SLURP1P55000 103 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 BPIFB4P59827 614 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ACAP1Q15027 740 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 TBR1Q16650 682 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ZNF568Q3ZCX4 644 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 TCERG1LQ5VWI1 586 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 KRT40Q6A162 431 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CIAPIN1Q6FI81 312 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 FAM124AQ86V42 546 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 KBTBD2Q8IY47 623 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ZDHHC14Q8IZN3 488 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ANKRD53Q8N9V6 530 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 MBD6Q96DN6 1003 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 RPL10LQ96L21 214 aaKnown RBP5.97□□□□□ -1.45
LINC00560-201ENST00000564593 SLC6A15Q9H2J7 730 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 FAM204AQ9H8W3 233 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 BCO1Q9HAY6 547 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 KMT5AQ9NQR1 393 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 TDP1Q9NUW8 608 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 GPRC5DQ9NZD1 345 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.97□□□□□ -1.45
LINC00560-201ENST00000564593 UBXN7O94888 489 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 JUNP05412 331 aaKnown RBP5.97□□□□□ -1.45
LINC00560-201ENST00000564593 VSIG10L2P0DP72 767 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 SLC6A9P48067 706 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 ADCY7P51828 1080 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CTSWP56202 376 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 PURAQ00577 322 aaKnown RBP5.97□□□□□ -1.45
LINC00560-201ENST00000564593 DUSP2Q05923 314 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 KIAA2012Q0VF49 1180 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 LLGL1Q15334 1064 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CCDC157Q569K6 752 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 THEMIS2Q5TEJ8 643 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CHST15Q7LFX5 561 aaPredicted RBP5.97□□□□□ -1.45
LINC00560-201ENST00000564593 OVCH2Q7RTZ1 564 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 PQLC1Q8N2U9 271 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 OR7D4Q8NG98 312 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CCHCR1Q8TD31 782 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 RAB24Q969Q5 203 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 TTC17Q96AE7 1141 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 CGRRF1Q99675 332 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 SARGQ9BW04 601 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 TRPS1Q9UHF7 1281 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 SIK3Q9Y2K2 1263 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 NR2E1Q9Y466 385 aa5.97□□□□□ -1.45
LINC00560-201ENST00000564593 A6NNZ2 444 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 SGTAO43765 313 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 B4GALT4O60513 344 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 ITGA10O75578 1167 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 TUSC2O75896 110 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 GASTP01350 101 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 FTLP02792 175 aaPredicted RBP5.96□□□□□ -1.46
LINC00560-201ENST00000564593 TRIM27P14373 513 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 GYPEP15421 78 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 SYN1P17600 705 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 CRHR1P34998 444 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 SREBF1P36956 1147 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 CDC42EP1Q00587 391 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 GALEQ14376 348 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 SRGAP1Q7Z6B7 1085 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 RSPH3Q86UC2 560 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 NSUN6Q8TEA1 469 aaKnown RBP5.96□□□□□ -1.46
LINC00560-201ENST00000564593 RGMAQ96B86 450 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 CYFIP2Q96F07 1278 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 CLPTM1LQ96KA5 538 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 PDCD2LQ9BRP1 358 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 JADE2Q9NQC1 790 aa5.96□□□□□ -1.46
LINC00560-201ENST00000564593 NRP1O14786 923 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 SLC16A6O15403 523 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 MTSS1O43312 755 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 B3GALT2O43825 422 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 HTR1BP28222 390 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 KCNC1P48547 511 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 MAP2K6P52564 334 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 USP14P54578 494 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 HGFACQ04756 655 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 RNF151Q2KHN1 245 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 GAGE13Q4V321 117 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 COBLL1Q53SF7 1204 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
LINC00560-201ENST00000564593 TMEM60Q9H2L4 133 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 LDAHQ9H6V9 325 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 LANCL2Q9NS86 450 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 NCDNQ9UBB6 729 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 FAM50BQ9Y247 325 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 POLHQ9Y253 713 aa5.95□□□□□ -1.46
LINC00560-201ENST00000564593 FAM227AF5H4B4 570 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 TPP1O14773 563 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 ADCY6O43306 1168 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 PTPN7P35236 360 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 IL12RB1P42701 662 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 GJA9P57773 515 aa5.94□□□□□ -1.46
LINC00560-201ENST00000564593 TARDBPQ13148 414 aaKnown RBP eCLIP5.94□□□□□ -1.46
LINC00560-201ENST00000564593 HDAC1Q13547 482 aaPredicted RBP5.94□□□□□ -1.46
LINC00560-201ENST00000564593 NFYCQ13952 458 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms