RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SULT1E1P49888 294 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 COG7P83436 770 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 MGAT5BQ3V5L5 792 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ENOSF1Q7L5Y1 443 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 CPB2Q96IY4 423 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 SPON2Q9BUD6 331 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 TUBE1Q9UJT0 475 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 IGSF9BQ9UPX0 1349 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 CD4P01730 458 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 BRD3Q15059 726 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ANKEF1Q9NU02 776 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 PITPNM2Q9BZ72 1349 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 FGGP02679 453 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 OAS2P29728 719 aaKnown RBP18.48■□□□□ 0.55
PTPN21-208ENST00000556564 KIZQ2M2Z5 673 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 PCNX4Q63HM2 1172 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 SLC30A10Q6XR72 485 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 DAGLBQ8NCG7 672 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 SP110Q9HB58 689 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ATP8A1Q9Y2Q0 1164 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 DR1Q01658 176 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 EFHC2Q5JST6 749 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 DEFB128Q7Z7B8 93 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ATP6V1E2Q96A05 226 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 ALKBH8Q96BT7 664 aaKnown RBP18.48■□□□□ 0.55
PTPN21-208ENST00000556564 FSD1LQ9BXM9 530 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 GPRC5CQ9NQ84 441 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 IL17RBQ9NRM6 502 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 RUSC1Q9BVN2 902 aa18.48■□□□□ 0.55
PTPN21-208ENST00000556564 DHX35Q9H5Z1 703 aaKnown RBP18.48■□□□□ 0.55
PTPN21-208ENST00000556564 PRG3Q9Y2Y8 225 aaPredicted RBP18.48■□□□□ 0.55
PTPN21-208ENST00000556564 IL18RAPO95256 599 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 AP1B1Q10567 949 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 GLRA4Q5JXX5 417 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 PCSK9Q8NBP7 692 aaKnown RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 IP6K2Q9UHH9 426 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 DFFAO00273 331 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 BBS9Q3SYG4 887 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 SV2CQ496J9 727 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 VSIG1Q86XK7 387 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 SLC7A5Q01650 507 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 PPATQ06203 517 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 TMED2Q15363 201 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 RAB44Q7Z6P3 723 aaPredicted RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 RDM1Q8NG50 284 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 TARS2Q9BW92 718 aaKnown RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 ATP1A2P50993 1020 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 SYTL5Q8TDW5 730 aaPredicted RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 POLR3CQ9BUI4 534 aaPredicted RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 MSH2P43246 934 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 MOB2Q70IA6 237 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 SH3TC2Q8TF17 1288 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 STMN2Q93045 179 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 RBM41Q96IZ5 413 aaKnown RBP18.47■□□□□ 0.55
PTPN21-208ENST00000556564 HOMER3Q9NSC5 361 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 FAM198AQ9UFP1 575 aa18.47■□□□□ 0.55
PTPN21-208ENST00000556564 SLC26A4O43511 780 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 AGO4Q9HCK5 861 aaKnown RBP18.46■□□□□ 0.55
PTPN21-208ENST00000556564 DONSONQ9NYP3 566 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 GPR182O15218 404 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 TROVE2P10155 538 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPN21-208ENST00000556564 PSMD6Q15008 389 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 PGM5Q15124 567 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 ZNF484Q5JVG2 852 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 TTC25Q96NG3 672 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 PQBP1O60828 265 aaKnown RBP18.46■□□□□ 0.55
PTPN21-208ENST00000556564 SREBF1P36956 1147 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 GRIN1Q05586 938 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 SGSM1Q2NKQ1 1148 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 CCHCR1Q8TD31 782 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 PRPF31Q8WWY3 499 aaKnown RBP18.46■□□□□ 0.55
PTPN21-208ENST00000556564 FAM49BQ9NUQ9 324 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 TJP2Q9UDY2 1190 aa18.46■□□□□ 0.55
PTPN21-208ENST00000556564 EXTL3O43909 919 aa18.46■□□□□ 0.54
PTPN21-208ENST00000556564 MED24O75448 989 aa18.46■□□□□ 0.54
PTPN21-208ENST00000556564 CPA5Q8WXQ8 436 aa18.46■□□□□ 0.54
PTPN21-208ENST00000556564 IDI2Q9BXS1 227 aa18.46■□□□□ 0.54
PTPN21-208ENST00000556564 ALDH7A1P49419 539 aaKnown RBP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 MRPS25P82663 173 aaKnown RBP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 STK4Q13043 487 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 ERVK-9P63128 1117 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 ERVK-24P63145 666 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 CDK17Q00537 523 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 TACC3Q9Y6A5 838 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 SYNGAP1Q96PV0 1343 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 ZRANB2O95218 330 aaKnown RBP eCLIP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 NFKBIAP25963 317 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 KRT17Q04695 432 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 SEC23AQ15436 765 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 AMHR2Q16671 573 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 DDX53Q86TM3 631 aaKnown RBP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 AGPAT1Q99943 283 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 FIS1Q9Y3D6 152 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 MYOM1P52179 1685 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 PTPRAP18433 802 aa18.45■□□□□ 0.54
PTPN21-208ENST00000556564 ZNF211Q13398 564 aaPredicted RBP18.45■□□□□ 0.54
PTPN21-208ENST00000556564 ANKRD20A3Q5VUR7 823 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms