RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 TTC38Q5R3I4 469 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 ELMSAN1Q6PJG2 1045 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 PADI6Q6TGC4 694 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 C15orf39Q6ZRI6 1047 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 GPR149Q86SP6 731 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CABP7Q86V35 215 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 NOSTRINQ8IVI9 506 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CCDC83Q8IWF9 413 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 ZBTB8OSQ8IWT0 167 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 FBXL6Q8N531 539 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 GSTCDQ8NEC7 633 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CMASQ8NFW8 434 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 PIGOQ8TEQ8 1089 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 HDAC7Q8WUI4 952 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 PBXIP1Q96AQ6 731 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 ASIC4Q96FT7 647 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 CPB2Q96IY4 423 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 FBXL18Q96ME1 805 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 ZFP42Q96MM3 310 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 RPS6KC1Q96S38 1066 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 KIF2CQ99661 725 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 TRIM6Q9C030 488 aaPredicted RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 C2orf40Q9H1Z8 148 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 FZD8Q9H461 694 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 POMKQ9H5K3 350 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 RXFP1Q9HBX9 757 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 MARCH5Q9NX47 278 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 DPP7Q9UHL4 492 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 NOL7Q9UMY1 257 aaKnown RBP7.32□□□□□ -1.24
SLIRP-203ENST00000554074 SORCS3Q9UPU3 1222 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 MYH15Q9Y2K3 1946 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 NOTCH4Q99466 2003 aa7.32□□□□□ -1.24
SLIRP-203ENST00000554074 LRRIQ4A6NIV6 560 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 C2CD4DB7Z1M9 353 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 LAD1O00515 517 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 N4BP3O15049 544 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 B4GALT5O43286 388 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 ATP2B1P20020 1258 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 KLRC2P26717 231 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 NAMPTP43490 491 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 OR1G1P47890 313 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 SCNN1GP51170 649 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 EFNA5P52803 228 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 NUBP1P53384 320 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 FOSBP53539 338 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 GUCY1B3Q02153 619 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 DSG1Q02413 1049 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 NHLH1Q02575 133 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 CREMQ03060 361 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 MTMR3Q13615 1198 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 PDIA5Q14554 519 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 MAPK6Q16659 721 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 RARS2Q5T160 578 aaKnown RBP7.31□□□□□ -1.24
SLIRP-203ENST00000554074 KIAA0319Q5VV43 1072 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 POTEGQ6S5H5 508 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 SUGP1Q8IWZ8 645 aaKnown RBP7.31□□□□□ -1.24
SLIRP-203ENST00000554074 C4orf32Q8N8J7 132 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 TDRD5Q8NAT2 981 aaKnown RBP7.31□□□□□ -1.24
SLIRP-203ENST00000554074 FAM184AQ8NB25 1140 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 AUTS2Q8WXX7 1259 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 COLEC11Q9BWP8 271 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 APOL5Q9BWW9 433 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 RAB34Q9BZG1 259 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 CCDC113Q9H0I3 377 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 NXF3Q9H4D5 531 aaKnown RBP7.31□□□□□ -1.24
SLIRP-203ENST00000554074 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.31□□□□□ -1.247e-7■□□□□ 9.3
SLIRP-203ENST00000554074 CHST7Q9NS84 486 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 MIOSQ9NXC5 875 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 FNIP2Q9P278 1114 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 PRG3Q9Y2Y8 225 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-203ENST00000554074 HES2Q9Y543 173 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 MIA3Q5JRA6 1907 aa7.31□□□□□ -1.24
SLIRP-203ENST00000554074 FANCMQ8IYD8 2048 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ANK1P16157 1881 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ARHGEF35A5YM69 484 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ACKR2O00590 384 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 TEX28O15482 410 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 NPTXRO95502 500 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 GLUD1P00367 558 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 AKAP5P24588 427 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 PRPHP41219 470 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 TUSC3Q13454 348 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 PRPF4BQ13523 1007 aaKnown RBP7.3□□□□□ -1.24
SLIRP-203ENST00000554074 GNL2Q13823 731 aaKnown RBP7.3□□□□□ -1.24
SLIRP-203ENST00000554074 RABEP1Q15276 862 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ZNF174Q15697 407 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 USP41Q3LFD5 358 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 DCAF4L1Q3SXM0 396 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 FUT10Q6P4F1 479 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 TMC5Q6UXY8 1006 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 CCDC149Q6ZUS6 474 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 OTOP3Q7RTS5 596 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-203ENST00000554074 ZBTB33Q86T24 672 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 KCTD17Q8N5Z5 321 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 C12orf76Q8N812 135 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-203ENST00000554074 IGSF22Q8N9C0 903 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
SLIRP-203ENST00000554074 DEPTORQ8TB45 409 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms