RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 KIFC3Q9BVG8 833 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 GCOM2Q9BZD3 368 aaPredicted RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 GANQ9H2C0 597 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 ASB7Q9H672 318 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 PHF24Q9UPV7 400 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 PTPN22Q9Y2R2 807 aa11.84□□□□□ -0.51
PABPN1-203ENST00000553960 BZW2Q9Y6E2 419 aaKnown RBP11.84□□□□□ -0.51
PABPN1-203ENST00000553960 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CCP110O43303 1012 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 IL18RAPO95256 599 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 LCA5LO95447 670 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 INHAP05111 366 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 ASGR1P07306 291 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CLTAP09496 248 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 TRIM21P19474 475 aaKnown RBP11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CCND3P30281 292 aaPredicted RBP11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CASP14P31944 242 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 KRT9P35527 623 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 PRKCIP41743 596 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CYP2J2P51589 502 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
PABPN1-203ENST00000553960 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
PABPN1-203ENST00000553960 NOLC1Q14978 699 aaKnown RBP eCLIP11.83□□□□□ -0.52
PABPN1-203ENST00000553960 KCNA10Q16322 511 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 DCAF4L1Q3SXM0 396 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 ZACNQ401N2 412 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 KRT39Q6A163 491 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 ENOSF1Q7L5Y1 443 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 RSPH3Q86UC2 560 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 EHBP1Q8NDI1 1231 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 NEK11Q8NG66 645 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 EEF2KMTQ96G04 330 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 HAPLN2Q9GZV7 340 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 MINDY3Q9H8M7 445 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 ABHD10Q9NUJ1 306 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 HDAC6Q9UBN7 1215 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 DERAQ9Y315 318 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 GRIN2DO15399 1336 aa11.83□□□□□ -0.52
PABPN1-203ENST00000553960 A0A087WZ62 844 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 MYADML2A6NDP7 307 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 EDN1P05305 212 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 MYL3P08590 195 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 SRGAP2CP0DJJ0 459 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 CYP2C9P11712 490 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 SKILP12757 684 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 UCHL3P15374 230 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 ELNP15502 786 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 ACLYP53396 1101 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 JAM2P57087 298 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 NLRP11P59045 1033 aaKnown RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 C1QTNF8P60827 252 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 BEX3Q00994 111 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 GCNT1Q02742 428 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 NCBP1Q09161 790 aaKnown RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 TRIM32Q13049 653 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 PTK7Q13308 1070 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 HIC1Q14526 733 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 XKR4Q5GH76 650 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 WDR59Q6PJI9 974 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 CBWD2Q8IUF1 395 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 WDR49Q8IV35 697 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 DHX38Q92620 1227 aaKnown RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 TAF4BQ92750 862 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 BAG1Q99933 345 aaPredicted RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
PABPN1-203ENST00000553960 VRTNQ9H8Y1 702 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 OGDHLQ9ULD0 1010 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 ANK1P16157 1881 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 HTTP42858 3142 aa11.82□□□□□ -0.52
PABPN1-203ENST00000553960 GOLGA6L9A6NEM1 432 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 LRRIQ3A6PVS8 624 aaPredicted RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 TISP43B9A030 160 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 RBAK-RBAKDNI3L0D1 243 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 DNM1LO00429 736 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 TREHO43280 583 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 TSPAN1O60635 241 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 PGK1P00558 417 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 GRM5P41594 1212 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms