RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 KCTD17Q8N5Z5 321 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 IGSF22Q8N9C0 903 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 SNX29Q8TEQ0 813 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 TMX3Q96JJ7 454 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 KLHL5Q96PQ7 755 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 HERC2P3Q9BVR0 1158 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 NXF3Q9H4D5 531 aaKnown RBP10.34□□□□□ -0.75
YBX3-218ENST00000546298 DDX19AQ9NUU7 478 aaKnown RBP10.34□□□□□ -0.75
YBX3-218ENST00000546298 MIOSQ9NXC5 875 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 KCNG1Q9UIX4 513 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 DNM3Q9UQ16 869 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 NLRC5Q86WI3 1866 aa10.34□□□□□ -0.75
YBX3-218ENST00000546298 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 LILRB3O75022 631 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 CNPP09543 421 aaKnown RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 EPCAMP16422 314 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 LIG1P18858 919 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 AKAP5P24588 427 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 GLUD2P49448 558 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 ZXDAP98168 799 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 CREMQ03060 361 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 NBR1Q14596 966 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 DCAF4L1Q3SXM0 396 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 RARS2Q5T160 578 aaKnown RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 TRIM67Q6ZTA4 783 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 CDR2LQ86X02 465 aaPredicted RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 FBXL18Q96ME1 805 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 VN1R3Q9BXE9 311 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 KCNH6Q9H252 994 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
YBX3-218ENST00000546298 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.33□□□□□ -0.76
YBX3-218ENST00000546298 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.33□□□□□ -0.76
YBX3-218ENST00000546298 K7ERI5 159 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 C2CD2LO14523 706 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 TADA2AO75478 443 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 C1RP00736 705 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 GJB2P29033 226 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 CLCN4P51793 760 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 DSG1Q02413 1049 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 SIGLEC14Q08ET2 396 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 DMP1Q13316 513 aaPredicted RBP10.32□□□□□ -0.76
YBX3-218ENST00000546298 TUSC3Q13454 348 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 PTPN21Q16825 1174 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 USP41Q3LFD5 358 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 CYP26C1Q6V0L0 522 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 GPR149Q86SP6 731 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 C12orf76Q8N812 135 aaPredicted RBP10.32□□□□□ -0.76
YBX3-218ENST00000546298 TDRD5Q8NAT2 981 aaKnown RBP10.32□□□□□ -0.76
YBX3-218ENST00000546298 GSTCDQ8NEC7 633 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 CCDC113Q9H0I3 377 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 POMKQ9H5K3 350 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 C17orf75Q9HAS0 396 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 RXFP1Q9HBX9 757 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 TSHZ2Q9NRE2 1034 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 MARCH5Q9NX47 278 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 SMC3Q9UQE7 1217 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 RBM19Q9Y4C8 960 aaKnown RBP10.32□□□□□ -0.76
YBX3-218ENST00000546298 PRUNE2Q8WUY3 3088 aa10.32□□□□□ -0.76
YBX3-218ENST00000546298 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 CCDC169A6NNP5 214 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 M0R296 226 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 GLUD1P00367 558 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 THP07101 528 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 ATP2C1P98194 919 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 HSP90AA2PQ14568 343 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 ECM1Q16610 540 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 KIAA0319Q5VV43 1072 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 LARP1BQ659C4 914 aaKnown RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 ARL6IP4Q66PJ3 421 aaKnown RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 FUT10Q6P4F1 479 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 C15orf39Q6ZRI6 1047 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 CCDC149Q6ZUS6 474 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 HFE2Q6ZVN8 426 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 OTOP3Q7RTS5 596 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 RNF168Q8IYW5 571 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 CMASQ8NFW8 434 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 HDAC7Q8WUI4 952 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 ACSF2Q96CM8 615 aaPredicted RBP10.31□□□□□ -0.76
YBX3-218ENST00000546298 CDK5RAP3Q96JB5 506 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 DRC1Q96MC2 740 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 NT5C3AQ9H0P0 336 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 SNTG2Q9NY99 539 aa10.31□□□□□ -0.76
YBX3-218ENST00000546298 ADAM28Q9UKQ2 775 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms