RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 APEX2Q9UBZ4 518 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
GNE-206ENST00000543356 RRN3P2A6NIE6 340 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 TMOD1P28289 359 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 PSMC4P43686 418 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 PHKA2P46019 1235 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 CLDN10P78369 228 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 GRM1Q13255 1194 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 RAPGEF1Q13905 1077 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 FMNL3Q8IVF7 1028 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 METTL13Q8N6R0 699 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 VTI1AQ96AJ9 217 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 CAPNS2Q96L46 248 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 SPAG5Q96R06 1193 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 ACO2Q99798 780 aaKnown RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 MSTO1Q9BUK6 570 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 TMEM117Q9H0C3 514 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 FZD8Q9H461 694 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 COQ4Q9Y3A0 265 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 THSD7BQ9C0I4 1608 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 TOM1L1O75674 476 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 PLEKP08567 350 aaPredicted RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 AKR1A1P14550 325 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 ANXA13P27216 316 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 EIF4A3P38919 411 aaKnown RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 GCLMP48507 274 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 KIF11P52732 1056 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 MBTD1Q05BQ5 628 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 FAM187BQ17R55 369 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 ASTE1Q2TB18 679 aaPredicted RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 DEFB115Q30KQ5 88 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 MARCH8Q5T0T0 291 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 KRT39Q6A163 491 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 KIF18AQ8NI77 898 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 AP5M1Q9H0R1 490 aa10.12□□□□□ -0.79
GNE-206ENST00000543356 AJAP1Q9UKB5 411 aaPredicted RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 BZW2Q9Y6E2 419 aaKnown RBP10.12□□□□□ -0.79
GNE-206ENST00000543356 RBAK-RBAKDNI3L0D1 243 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ACKR2O00590 384 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ABLIM1O14639 778 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 AOC2O75106 756 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 PROZP22891 400 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 PRKCIP41743 596 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ARHGAP25P42331 645 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 NLRP11P59045 1033 aaKnown RBP10.11□□□□□ -0.79
GNE-206ENST00000543356 MCL1Q07820 350 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 CRELD2Q6UXH1 353 aaPredicted RBP10.11□□□□□ -0.79
GNE-206ENST00000543356 TSHZ1Q6ZSZ6 1077 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 KAT2BQ92831 832 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ZBTB10Q96DT7 871 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 STK33Q9BYT3 514 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ARHGAP39Q9C0H5 1083 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 DEF6Q9H4E7 631 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
GNE-206ENST00000543356 ANKFY1Q9P2R3 1169 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 F8VZ95 297 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 HAS3O00219 553 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 TULP2O00295 520 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 CLGNO14967 610 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 CLDN3O15551 220 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 FAM189A1O60320 539 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 GJB1P08034 283 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 CYBAP13498 195 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 FERP16591 822 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 STAT1P42224 750 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 SPA17Q15506 151 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 ARHGAP29Q52LW3 1261 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 MFSD14CQ5VZR4 134 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 CCDC127Q96BQ5 260 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
GNE-206ENST00000543356 ZBTB45Q96K62 511 aaPredicted RBP10.11□□□□□ -0.79
GNE-206ENST00000543356 IFT122Q9HBG6 1241 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 DNAJC12Q9UKB3 198 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 NRCAMQ92823 1304 aa10.11□□□□□ -0.79
GNE-206ENST00000543356 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 SMIM10L2AP0DMW4 78 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 SMIM10L2BP0DMW5 78 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.79
GNE-206ENST00000543356 GPC3P51654 580 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 KLHL30Q0D2K2 578 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 PRPF4BQ13523 1007 aaKnown RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 MFSD10Q14728 455 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 MPZL3Q6UWV2 235 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 SYT10Q6XYQ8 523 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 C15orf39Q6ZRI6 1047 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 ZNF410Q86VK4 478 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TRPV1Q8NER1 839 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 TRIB2Q92519 343 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 KATNAL1Q9BW62 490 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 HAUS4Q9H6D7 363 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 PTPRHQ9HD43 1115 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 LZTFL1Q9NQ48 299 aa10.1□□□□□ -0.79
GNE-206ENST00000543356 RBAKQ9NYW8 714 aaPredicted RBP10.1□□□□□ -0.79
GNE-206ENST00000543356 MYO1AQ9UBC5 1043 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms