RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MDFICQ9P1T7 246 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 USP36Q9P275 1121 aaKnown RBP1.4□□□□□ -2.19
COPB1-212ENST00000534771 LRIT1Q9P2V4 623 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 NDOR1Q9UHB4 597 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 PFDN2Q9UHV9 154 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 ATP11BQ9Y2G3 1177 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 MRPS23Q9Y3D9 190 aaKnown RBP1.4□□□□□ -2.19
COPB1-212ENST00000534771 TNPO3Q9Y5L0 923 aaKnown RBP1.4□□□□□ -2.19
COPB1-212ENST00000534771 FPGT-TNNI3KV9GXZ4 949 aa1.4□□□□□ -2.19
COPB1-212ENST00000534771 TCRBV16S1A1N1A0A5B0 115 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PRPF6O94906 941 aaKnown RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 LY86O95711 162 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 BMP15O95972 392 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 CFIP05156 583 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 CELA2AP08217 269 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 FAM153BP0C7A2 387 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 FDXRP22570 491 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PTX3P26022 381 aaPredicted RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 RBM25P49756 843 aaKnown RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 SSRP1Q08945 709 aaKnown RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 MYBPC3Q14896 1274 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 EPHA7Q15375 998 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZNF174Q15697 407 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 SRSF7Q16629 238 aaKnown RBP eCLIP1.39□□□□□ -2.19
COPB1-212ENST00000534771 BMT2Q1RMZ1 405 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 MTERF2Q49AM1 385 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZC3H12BQ5HYM0 836 aaKnown RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 AKNAD1Q5T1N1 836 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 FAM102AQ5T9C2 384 aaPredicted RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 ABHD17CQ6PCB6 329 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 UNQ6494/PRO21346Q6UXR6 183 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZNF788Q6ZQV5 615 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PTF1AQ7RTS3 328 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 GPR149Q86SP6 731 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 UNC5BQ8IZJ1 945 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 TMEM132CQ8N3T6 1108 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PDPRQ8NCN5 879 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PIK3C3Q8NEB9 887 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 GSTCDQ8NEC7 633 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 OR10H5Q8NGA6 315 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZNF428Q96B54 188 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 SCLYQ96I15 445 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PDLIM2Q96JY6 352 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 HEPHQ9BQS7 1158 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 HIRIP3Q9BW71 556 aaPredicted RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 TRIM55Q9BYV6 548 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 CCDC113Q9H0I3 377 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 KLK15Q9H2R5 256 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 PCIF1Q9H4Z3 704 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 TBCCD1Q9NVR7 557 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 FOXJ2Q9P0K8 574 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZNF70Q9UC06 446 aaPredicted RBP1.39□□□□□ -2.19
COPB1-212ENST00000534771 NOX1Q9Y5S8 564 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 MYPNQ86TC9 1320 aa1.39□□□□□ -2.19
COPB1-212ENST00000534771 ZMYM3Q14202 1370 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 DRGXA6NNA5 263 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 MARCH11A6NNE9 402 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 B5MCH6 92 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 H7C1D1 291 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 MGST3O14880 152 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 PCDH8O95206 1070 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 IGKV2-30P06310 120 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 SLC9A1P19634 815 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 XPAP23025 273 aaPredicted RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 TKTP29401 623 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 PTGER1P34995 402 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 RANGAP1P46060 587 aaPredicted RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 MECP2P51608 486 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 MFAP1P55081 439 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 MRPS35P82673 323 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 SCAPQ12770 1279 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 RASGRF1Q13972 1273 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 TRIM61Q5EBN2 209 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 TSHZ3Q63HK5 1081 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 METRNLQ641Q3 311 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 ANKS6Q68DC2 871 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 KIAA1841Q6NSI8 718 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 C11orf87Q6NUJ2 197 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 BTNL9Q6UXG8 535 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 DDX53Q86TM3 631 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 MAPKAPK5Q8IW41 473 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 ZZZ3Q8IYH5 903 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 FAM43AQ8N2R8 423 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 C7orf31Q8N865 590 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 KIAA1958Q8N8K9 716 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 SMRP1Q8NCR6 262 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 ZFP28Q8NHY6 868 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 TFAP2CQ92754 450 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 FERMT2Q96AC1 680 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 FUBP1Q96AE4 644 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 FCRL4Q96PJ5 515 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 CDC5LQ99459 802 aaKnown RBP1.38□□□□□ -2.19
COPB1-212ENST00000534771 TIMP4Q99727 224 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 MYL10Q9BUA6 226 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 CABP5Q9NP86 173 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 CASS4Q9NQ75 786 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 TMEM74BQ9NUR3 256 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 ASB6Q9NWX5 421 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 PODXL2Q9NZ53 605 aa1.38□□□□□ -2.19
COPB1-212ENST00000534771 ARPP21Q9UBL0 812 aaPredicted RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms