RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ARL5CA6NH57 179 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 GAS7O60861 476 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 USP11P51784 963 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 CREMQ03060 361 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 USP41Q3LFD5 358 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 PPM1JQ5JR12 505 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 FUT10Q6P4F1 479 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 GRASPQ7Z6J2 395 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 JPH2Q9BR39 696 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 SH2D3AQ9BRG2 576 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 TEKT3Q9BXF9 490 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 COL4A3BPQ9Y5P4 624 aa18.2■□□□□ 0.5
CHMP4A-203ENST00000527154 F5P12259 2224 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 PCBP1Q15365 356 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 LRCH2Q5VUJ6 765 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 LAIR1Q6GTX8 287 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 GAD1Q99259 594 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 NOTCH4Q99466 2003 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 DHX33Q9H6R0 707 aaKnown RBP18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 C6orf50Q9HD87 102 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 GMEB2Q9UKD1 530 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 IPPQ9Y573 584 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 ASPMQ8IZT6 3477 aa18.19■□□□□ 0.5
CHMP4A-203ENST00000527154 NID2Q14112 1375 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CNOT1A5YKK6 2376 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 NCAM2O15394 837 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CHMP2AO43633 222 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CD72P21854 359 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 GNA11P29992 359 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 MLH1P40692 756 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 NTHL1P78549 312 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 Q4G0T1 1027 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 TSSK4Q6SA08 328 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CCDC12Q8WUD4 166 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CCDC51Q96ER9 411 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CLSTN3Q9BQT9 956 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 IER2Q9BTL4 223 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 COLEC11Q9BWP8 271 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 ADAM28Q9UKQ2 775 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 PPME1Q9Y570 386 aa18.18■□□□□ 0.5
CHMP4A-203ENST00000527154 CYP3A7-CYP3A51PA0A087WV96 503 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 RETP07949 1114 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 ITGA4P13612 1032 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 CYP3A7P24462 503 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 PMLP29590 882 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 AXLP30530 894 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 SCNN1GP51170 649 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 SHC2P98077 582 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 ADCY1Q08828 1119 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 MTAPQ13126 283 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 MIER3Q7Z3K6 550 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 IFNLR1Q8IU57 520 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 NPAS3Q8IXF0 933 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 CELF5Q8N6W0 485 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 ITFG1Q8TB96 612 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 PIK3R5Q8WYR1 880 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 GJA10Q969M2 543 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 EIF2AQ9BY44 585 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 CHRDQ9H2X0 955 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 FRYQ5TBA9 3013 aa18.17■□□□□ 0.5
CHMP4A-203ENST00000527154 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 ECI2O75521 394 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 RPL17P18621 184 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 ADD1P35611 737 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 SPEM2Q0P670 501 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 RTP2Q5QGT7 225 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 POTEHQ6S545 545 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 ZNF852Q6ZMS4 543 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 TPRG1Q6ZUI0 275 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 ETNPPLQ8TBG4 499 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 PRPF31Q8WWY3 499 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
CHMP4A-203ENST00000527154 PRPF3O43395 683 aaKnown RBP18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 TSPAN1O60635 241 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 NR1I2O75469 434 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 NRLP54845 237 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 PSMC5P62195 406 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 LAMTOR4Q0VGL1 99 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 TSGA10IPQ3SY00 556 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 RTL10Q7L3V2 364 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 LNX1Q8TBB1 728 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 PSPC1Q8WXF1 523 aaKnown RBP18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 AVENQ9NQS1 362 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 ZZEF1O43149 2961 aa18.15■□□□□ 0.5
CHMP4A-203ENST00000527154 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 TM4SF5O14894 197 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 C8AP07357 584 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 POU5F1BQ06416 359 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 CSRP2Q16527 193 aa18.14■□□□□ 0.49
CHMP4A-203ENST00000527154 AMHR2Q16671 573 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms