RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SPINK2P20155 84 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 GAS6Q14393 721 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 CCDC6Q16204 474 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 USP41Q3LFD5 358 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 PPM1LQ5SGD2 360 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 WWC2Q6AWC2 1192 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 FUT10Q6P4F1 479 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 LONP2Q86WA8 852 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 NCOA7Q8NI08 942 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 ARRDC1-AS1Q9H2J1 176 aa15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 HELZ2Q9BYK8 2649 aaKnown RBP15.61■□□□□ 0.09
NKX3-1-202ENST00000523261 E7EWF7 191 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 K7ESF4 209 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 XYLBO75191 536 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 C8AP07357 584 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 RXRAP19793 462 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 CREMQ03060 361 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 FOXC1Q12948 553 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 UBXN11Q5T124 520 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 LIN9Q5TKA1 542 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 CCDC82Q8N4S0 544 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 ING5Q8WYH8 240 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 HCFC1R1Q9NWW0 138 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 TCEAL9Q9UHQ7 104 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 KCNH3Q9ULD8 1083 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 POLIQ9UNA4 740 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 SAMM50Q9Y512 469 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 SPAG17Q6Q759 2223 aa15.6■□□□□ 0.09
NKX3-1-202ENST00000523261 SMG1Q96Q15 3661 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 IGKV6-21A0A0C4DH24 114 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 AXIN1O15169 862 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 PAPSS2O95340 614 aaPredicted RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 POU2F2P09086 479 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 CLK2P49760 499 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 AP3B2Q13367 1082 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 UGCGQ16739 394 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 HEATR6Q6AI08 1181 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 TANGO2Q6ICL3 276 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 POTEHQ6S545 545 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 PRSS55Q6UWB4 352 aaPredicted RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 CEP68Q76N32 757 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 RHPN2Q8IUC4 686 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 KSR1Q8IVT5 923 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 MB21D2Q8IYB1 491 aaPredicted RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 SPEM1Q8N4L4 309 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 ZCCHC14Q8WYQ9 949 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 CEP89Q96ST8 783 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 COLEC11Q9BWP8 271 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 DNMT3BQ9UBC3 853 aaKnown RBP15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 LAMA1P25391 3075 aa15.59■□□□□ 0.09
NKX3-1-202ENST00000523261 IGSF10Q6WRI0 2623 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 WDR64B1ANS9 1081 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 GIPC1O14908 333 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 ZIC2O95409 532 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 TOP3BO95985 862 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 CYP3A4P08684 503 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 CHRNB1P11230 501 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 DNM2P50570 870 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 NOVA1P51513 510 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 ADCY7P51828 1080 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 NAPAP54920 295 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 PABPC1LQ4VXU2 614 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 SMG8Q8ND04 991 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 FAM3CQ92520 227 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 ELSPBP1Q96BH3 223 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 MCRS1Q96EZ8 462 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 LOXL4Q96JB6 756 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 GAD1Q99259 594 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 IFT122Q9HBG6 1241 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 MIOSQ9NXC5 875 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 GDE1Q9NZC3 331 aa15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 TDRD15B5MCY1 1934 aaKnown RBP15.58■□□□□ 0.08
NKX3-1-202ENST00000523261 NR1I2O75469 434 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 EPN2O95208 641 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 FCARP24071 287 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 HOXA11P31270 313 aaPredicted RBP15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 SCNN1GP51170 649 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 ZNF252P-AS1Q0IIN9 211 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 RTP2Q5QGT7 225 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 PLA2G2CQ5R387 149 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 PPP1R18Q6NYC8 613 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 TMTC3Q6ZXV5 915 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 NLRP4Q96MN2 994 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 CLSTN3Q9BQT9 956 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 BRD9Q9H8M2 597 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 UBN1Q9NPG3 1134 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 DISC1Q9NRI5 854 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 ADAM28Q9UKQ2 775 aa15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 MRPS23Q9Y3D9 190 aaKnown RBP15.57■□□□□ 0.08
NKX3-1-202ENST00000523261 TICRRQ7Z2Z1 1910 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 LOC400499M0QZD8 3231 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 ITGA4P13612 1032 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 MLH1P40692 756 aa15.56■□□□□ 0.08
NKX3-1-202ENST00000523261 SETQ01105 290 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms