RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ACOT2P49753 483 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 KCNA1Q09470 495 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 SHROOM1Q2M3G4 852 aaPredicted RBP12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 ENOSF1Q7L5Y1 443 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 OR2W6PQ8NHA6 318 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 C1orf54Q8WWF1 131 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 TMEM143Q96AN5 459 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 TEX13BQ9BXU2 312 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 BAIAP2L1Q9UHR4 511 aa12.05□□□□□ -0.48
PCDHGB4-201ENST00000519479 CNGA1P29973 690 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 DHX34Q14147 1143 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 MAPK6Q16659 721 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 APTXQ7Z2E3 356 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 ERICH1Q86X53 443 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 MORC4Q8TE76 937 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF668Q96K58 619 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 XIRP1Q702N8 1843 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 PDE2AO00408 941 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 SCP2P22307 547 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 GNA15P30679 374 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 PHBP35232 272 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 SAMD7Q7Z3H4 446 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 CREG2Q8IUH2 290 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZNF280CQ8ND82 737 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 RNF25Q96BH1 459 aaPredicted RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 HAUS1Q96CS2 278 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 TSNARE1Q96NA8 513 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 HESX1Q9UBX0 185 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP2R2AP63151 447 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 C6orf163Q5TEZ5 329 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 MEI1Q5TIA1 1274 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 MOV10L1Q9BXT6 1211 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 F8VZ95 297 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 XKR3Q5GH77 459 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 RFX6Q8HWS3 928 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 CASKIN2Q8WXE0 1202 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 CALN1Q9BXU9 219 aa12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
PCDHGB4-201ENST00000519479 KLRG2A4D1S0 409 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 GLI1P08151 1106 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 COMTP21964 271 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 MUTP22033 750 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CASC4Q6P4E1 433 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 EXOC8Q8IYI6 725 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 TMEM35BQ8NCS4 154 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 GTF3C2Q8WUA4 911 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 ISCUQ9H1K1 167 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 OSGEPQ9NPF4 335 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CRYBG1Q9Y4K1 1723 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 H7C0C1 242 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 P4HA2O15460 535 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 MMEP08473 750 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 ATP5OP48047 213 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 TMED2Q15363 201 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CBWD2Q8IUF1 395 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PSPC1Q8WXF1 523 aaKnown RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 BAP1Q92560 729 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CYP3A7-CYP3A51PA0A087WV96 503 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 TLR3O15455 904 aaKnown RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CYP3A7P24462 503 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 IRAK1P51617 712 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PRKCEQ02156 737 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 SURF1Q15526 300 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 CPA5Q8WXQ8 436 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PI4K2AQ9BTU6 479 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 MIS12Q9H081 205 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 RPF1Q9H9Y2 349 aaKnown RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZBTB22O15209 634 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PJA2O43164 708 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 PPP1R37O75864 691 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 NEDD9Q14511 834 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 SLC35G1Q2M3R5 365 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 EPC2Q52LR7 807 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 COBLL1Q53SF7 1204 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 UVRAGQ9P2Y5 699 aa12.03□□□□□ -0.48
PCDHGB4-201ENST00000519479 GMNCA6NCL1 334 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 ZSCAN5CA6NGD5 496 aaPredicted RBP12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 MED7O43513 233 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 SUN1O94901 812 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 TBXAS1P24557 533 aaPredicted RBP12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 EPHX2P34913 555 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 MAGEA9P43362 315 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 AMPD2Q01433 879 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 LGSNQ5TDP6 509 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 ANKRD13AQ8IZ07 590 aa12.02□□□□□ -0.48
PCDHGB4-201ENST00000519479 TMEM8AQ9HCN3 771 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms