RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DSC2Q02487 901 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TLE2Q04725 743 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PPP2R5CQ13362 524 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MOGSQ13724 837 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 LRP8Q14114 963 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TRIM25Q14258 630 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PTK2BQ14289 1009 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADRM1Q16186 407 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MEA1Q16626 185 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 KHDC1Q4VXA5 237 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 RTP2Q5QGT7 225 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CATSPEREQ5SY80 951 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRAMEF18Q5VWM3 479 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM180AQ6UWF9 173 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 KIAA1211Q6ZU35 1233 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 RNF44Q7L0R7 432 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 NLRP10Q86W26 655 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CHD1LQ86WJ1 897 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 IQCA1Q86XH1 822 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADGRG2Q8IZP9 1017 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 FANCBQ8NB91 859 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CCDC191Q8NCU4 936 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 OR14C36Q8NHC7 312 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TDRD7Q8NHU6 1098 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADAMTS18Q8TE60 1221 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SH3RF2Q8TEC5 729 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 WHAMMQ8TF30 809 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ANKS1AQ92625 1134 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 GOLGA1Q92805 767 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SUCLG2Q96I99 432 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MAML3Q96JK9 1138 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CDHR1Q96JP9 859 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZC3H10Q96K80 434 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 COX4I2Q96KJ9 171 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 Q96M66 194 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 COG8Q96MW5 612 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRPF18Q99633 342 aaKnown RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 VRK1Q99986 396 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLF1Q9BQI6 1058 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SIL1Q9H173 461 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CDIP1Q9H305 208 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SUGCTQ9HAC7 445 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 GRPEL1Q9HAV7 217 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SAYSD1Q9NPB0 183 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MYO1AQ9UBC5 1043 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZHX1Q9UKY1 873 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 NUMBLQ9Y6R0 609 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A0B4J269 797 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PQ27 194 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PQ64 194 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PQC6 194 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PQD8 194 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 GNAT3A8MTJ3 354 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FGF10O15520 208 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 TBC1D4O60343 1298 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 DOK2O60496 412 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 NPR1P16066 1061 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PTPN1P18031 435 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 ALOX12P18054 663 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 RPL10P27635 214 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 GJA4P35212 333 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 KIR3DL1P43629 444 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 AARSP49588 968 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 RPS16P62249 146 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 UBE3AQ05086 875 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 WASHC5Q12768 1159 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FOXO1Q12778 655 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CUL4AQ13619 759 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PKDCCQ504Y2 493 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLFN12LQ6IEE8 588 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CNKSR3Q6P9H4 555 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CYP2R1Q6VVX0 501 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM47EQ6ZV65 393 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 KCTD1Q719H9 257 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 KDELC2Q7Z4H8 507 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 VSIG1Q86XK7 387 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CPOQ8IVL8 374 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 DZIP1LQ8IYY4 767 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 NRSN1Q8IZ57 195 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCSK9Q8NBP7 692 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 SIMC1Q8NDZ2 872 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 GIMAP7Q8NHV1 300 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM71BQ8TC56 605 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 BRIX1Q8TDN6 353 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FBLIM1Q8WUP2 373 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM167AQ96KS9 214 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 YME1L1Q96TA2 773 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 BAG1Q99933 345 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 NOL10Q9BSC4 688 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PAIP1Q9H074 479 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 TAF1DQ9H5J8 278 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 GREM2Q9H772 168 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZWILCHQ9H900 591 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 CD248Q9HCU0 757 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC6A20Q9NP91 592 aa4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 PIH1D1Q9NWS0 290 aaKnown RBP4.12□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADD3Q9UEY8 706 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms