RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SSBP05455 408 aaKnown RBP eCLIP22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 ADH1AP07327 375 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 TTC38Q5R3I4 469 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 GPR149Q86SP6 731 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 RNF168Q8IYW5 571 aaPredicted RBP22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 TDRD5Q8NAT2 981 aaKnown RBP22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 ZFP42Q96MM3 310 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 APOL6Q9BWW8 343 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 FZD8Q9H461 694 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 NXF3Q9H4D5 531 aaKnown RBP22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 GPRC5CQ9NQ84 441 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 CDH22Q9UJ99 828 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 SORCS3Q9UPU3 1222 aa22.1■■□□□ 1.13
UBE2D3-220ENST00000505307 B4GALT5O43286 388 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 NPTXRO95502 500 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 EFEMP2O95967 443 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 CYP11B2P19099 503 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 SP100P23497 879 aaPredicted RBP22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 GLUD2P49448 558 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 GRIK3Q13003 919 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 MTMR3Q13615 1198 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 PPP2R5AQ15172 486 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 PADI6Q6TGC4 694 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 CYP26C1Q6V0L0 522 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 C15orf39Q6ZRI6 1047 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 MAEAQ7L5Y9 396 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 KREMEN2Q8NCW0 462 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 ASIC4Q96FT7 647 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 RXFP1Q9HBX9 757 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 MIOSQ9NXC5 875 aa22.09■■□□□ 1.13
UBE2D3-220ENST00000505307 N4BP3O15049 544 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 FXR2P51116 673 aaKnown RBP eCLIP22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 DSG1Q02413 1049 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 NHLH1Q02575 133 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 MAPK6Q16659 721 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 KIAA0319Q5VV43 1072 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 POTEGQ6S5H5 508 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 TMC5Q6UXY8 1006 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 CMASQ8NFW8 434 aaPredicted RBP22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 ACSF2Q96CM8 615 aaPredicted RBP22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 PARP2Q9UGN5 583 aa22.08■■□□□ 1.13
UBE2D3-220ENST00000505307 C2CD2LO14523 706 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 WEE2P0C1S8 567 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 AKAP5P24588 427 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 NAMPTP43490 491 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 PDIA5Q14554 519 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 OTOP3Q7RTS5 596 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 ALYREFQ86V81 257 aaKnown RBP22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 GSTCDQ8NEC7 633 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 HDAC7Q8WUI4 952 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 RHOBTB2Q9BYZ6 727 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 RAB34Q9BZG1 259 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 CHST7Q9NS84 486 aa22.07■■□□□ 1.12
UBE2D3-220ENST00000505307 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 U2AF2P26368 475 aaKnown RBP eCLIP22.06■■□□□ 1.123e-9■■■□□ 15
UBE2D3-220ENST00000505307 CREMQ03060 361 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 PRPF4BQ13523 1007 aaKnown RBP22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 CCDC149Q6ZUS6 474 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 TAS1R1Q7RTX1 841 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 DEPTORQ8TB45 409 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 ADPGKQ9BRR6 497 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 KIF3AQ9Y496 699 aa22.06■■□□□ 1.12
UBE2D3-220ENST00000505307 ZDBF2Q9HCK1 2354 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 ACKR2O00590 384 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 TEX28O15482 410 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 GLUD1P00367 558 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 CCT6AP40227 531 aaKnown RBP22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 EFNA5P52803 228 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 NUBP1P53384 320 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 PTPN5P54829 565 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 TMEM132AQ24JP5 1023 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 USP41Q3LFD5 358 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 KANK3Q6NY19 840 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 FUT10Q6P4F1 479 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 CDR2LQ86X02 465 aaPredicted RBP22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 C4orf32Q8N8J7 132 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 KIFAP3Q92845 792 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 IFT74Q96LB3 600 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 KIF2CQ99661 725 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 LRWD1Q9UFC0 647 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 ADAM28Q9UKQ2 775 aa22.05■■□□□ 1.12
UBE2D3-220ENST00000505307 LAD1O00515 517 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 PRKCBP05771 671 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 TUSC3Q13454 348 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 PLEKHA4Q9H4M7 779 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 PDZD7Q9H5P4 517 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 MAN1C1Q9NR34 630 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 KLK14Q9P0G3 267 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 FNIP2Q9P278 1114 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 LIMD1Q9UGP4 676 aa22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 TDRD15B5MCY1 1934 aaKnown RBP22.04■■□□□ 1.12
UBE2D3-220ENST00000505307 TADA2AO75478 443 aa22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 APBB1IPQ7Z5R6 666 aaPredicted RBP22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 BSNDQ8WZ55 320 aa22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 CCDC113Q9H0I3 377 aa22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 IRF2BPLQ9H1B7 796 aa22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 BHMT2Q9H2M3 363 aa22.03■■□□□ 1.12
UBE2D3-220ENST00000505307 SF3B1O75533 1304 aaKnown RBP eCLIP22.03■■□□□ 1.122e-6■■■■■ 58.5
UBE2D3-220ENST00000505307 PAPLNO95428 1278 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms