RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 POMGNT1Q8WZA1 660 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 MSTO1Q9BUK6 570 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 CCDC94Q9BW85 323 aaPredicted RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 TRAIPQ9BWF2 469 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 APOL6Q9BWW8 343 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 GBP3Q9H0R5 595 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 ELAC1Q9H777 363 aaKnown RBP12.46□□□□□ -0.41
NUP50-216ENST00000486184 KIAA1468Q9P260 1216 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 GDAQ9Y2T3 454 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 IPPQ9Y573 584 aa12.46□□□□□ -0.41
NUP50-216ENST00000486184 PDCD11Q14690 1871 aaKnown RBP12.46□□□□□ -0.42
NUP50-216ENST00000486184 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 TLL1O43897 1013 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 PPP1R2P41236 205 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 KCNA1Q09470 495 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 KYAT1Q16773 422 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 KNOP1Q1ED39 458 aaKnown RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 UBXN11Q5T124 520 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 RASIP1Q5U651 963 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 HERC6Q8IVU3 1022 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 TRIML1Q8N9V2 468 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 GOLGA5Q8TBA6 731 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 YME1L1Q96TA2 773 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 CDT1Q9H211 546 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 UBN1Q9NPG3 1134 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 PARP2Q9UGN5 583 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 MAN1B1Q9UKM7 699 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 COLQQ9Y215 455 aaPredicted RBP12.45□□□□□ -0.42
NUP50-216ENST00000486184 KIAA1671Q9BY89 1806 aa12.45□□□□□ -0.42
NUP50-216ENST00000486184 CALUO43852 315 aaPredicted RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 ZNF623O75123 536 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 GJB5O95377 273 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 PROZP22891 400 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 OSTNP61366 133 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 FAM189BP81408 668 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 MCL1Q07820 350 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 KLHL40Q2TBA0 621 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 GLB1LQ6UWU2 654 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 TMCO2Q7Z6W1 182 aaPredicted RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 THNSL1Q8IYQ7 743 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 SMYD4Q8IYR2 804 aaPredicted RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 URGCPQ8TCY9 931 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 LPPQ93052 612 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 ZBTB45Q96K62 511 aaPredicted RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 RPS6KC1Q96S38 1066 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 TSG101Q99816 390 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 TOPORSQ9NS56 1045 aaPredicted RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 CGNQ9P2M7 1197 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 MSRAQ9UJ68 235 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 AGO2Q9UKV8 859 aaKnown RBP12.44□□□□□ -0.42
NUP50-216ENST00000486184 HES2Q9Y543 173 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 INSL6Q9Y581 213 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 ANK1P16157 1881 aa12.44□□□□□ -0.42
NUP50-216ENST00000486184 ZMYM2Q9UBW7 1377 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 TBKBP1A7MCY6 615 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 PSMA7O14818 248 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 OGTO15294 1046 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 LDHAP00338 332 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 FGFR1P11362 822 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 GARTP22102 1010 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 GRM5P41594 1212 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 MORC3Q14149 939 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 RAB30Q15771 203 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 MRPL10Q7Z7H8 261 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 SMG8Q8ND04 991 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 HELQQ8TDG4 1101 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 ACAP3Q96P50 834 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 RAD9AQ99638 391 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 MRPL9Q9BYD2 267 aaKnown RBP12.43□□□□□ -0.42
NUP50-216ENST00000486184 PRO3102Q9H379 93 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
NUP50-216ENST00000486184 INPP5FQ9Y2H2 1132 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms