RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 RSAD1Q9HA92 442 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 PRSS50Q9UI38 385 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 DENND2AQ9ULE3 1009 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 IPPQ9Y573 584 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 PCDHGB6Q9Y5F9 930 aa5.59□□□□□ -1.51
VPS13A-211ENST00000484581 MYPNQ86TC9 1320 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CAPN8A6NHC0 703 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 C9orf118A6NHY6 69 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CCDC154A6NI56 674 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 RASA4BC9J798 803 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 NPHP1O15259 732 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 RASA4O43374 803 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CYP7B1O75881 506 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 ALDH2P05091 517 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 EDNRBP24530 442 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 HTR1BP28222 390 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 PEX2P28328 305 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 GPR15P49685 360 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CDK17Q00537 523 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 BTKQ06187 659 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 PPARAQ07869 468 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 DBPQ10586 325 aaPredicted RBP5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CNN3Q15417 329 aaKnown RBP5.58□□□□□ -1.52
VPS13A-211ENST00000484581 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 RNF220Q5VTB9 566 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 KLHDC10Q6PID8 442 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 ANKRD42Q8N9B4 389 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 ARRDC4Q8NCT1 418 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CALML6Q8TD86 181 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 RPGRQ92834 1020 aaKnown RBP5.58□□□□□ -1.52
VPS13A-211ENST00000484581 FATE1Q969F0 183 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CCDC138Q96M89 665 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CLIC6Q96NY7 704 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 CGRRF1Q99675 332 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 NAP1L4Q99733 375 aaKnown RBP5.58□□□□□ -1.52
VPS13A-211ENST00000484581 LRFN3Q9BTN0 628 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 TMEM168Q9H0V1 697 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 L2HGDHQ9H9P8 463 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 KMT5AQ9NQR1 393 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 SRRDQ9UH36 339 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 ST6GALNAC2Q9UJ37 374 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 LIMCH1Q9UPQ0 1083 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 WASF3Q9UPY6 502 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 POLHQ9Y253 713 aa5.58□□□□□ -1.52
VPS13A-211ENST00000484581 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 MAFGO15525 162 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 LAMTOR5O43504 91 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
VPS13A-211ENST00000484581 MPIG6BO95866 241 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 TYRP1P17643 537 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 PTGS1P23219 599 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 MC4RP32245 332 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 IL13P35225 146 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 HALP42357 657 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 ADRM1Q16186 407 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 UNQ6494/PRO21346Q6UXR6 183 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 CDYL2Q8N8U2 506 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 SLC16A11Q8NCK7 471 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 NRG4Q8WWG1 115 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 LRTOMTQ8WZ04 291 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 TOE1Q96GM8 510 aaKnown RBP5.57□□□□□ -1.52
VPS13A-211ENST00000484581 PITHD1Q9GZP4 211 aaPredicted RBP5.57□□□□□ -1.52
VPS13A-211ENST00000484581 NUP62CLQ9H1M0 184 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 TRMT13Q9NUP7 481 aaKnown RBP5.57□□□□□ -1.52
VPS13A-211ENST00000484581 DTLQ9NZJ0 730 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 HSPBP1Q9NZL4 362 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 STXBP5LQ9Y2K9 1186 aa5.57□□□□□ -1.52
VPS13A-211ENST00000484581 CFAP20Q9Y6A4 193 aaKnown RBP5.57□□□□□ -1.52
VPS13A-211ENST00000484581 F5H423 210 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-211ENST00000484581 MGEA5O60502 916 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 RGS3P49796 1198 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 POLD3Q15054 466 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-211ENST00000484581 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 C3orf36Q3SXR2 165 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 CD276Q5ZPR3 534 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 DAAM2Q86T65 1068 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 MYLK4Q86YV6 388 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-211ENST00000484581 CPXCR1Q8N123 301 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 DEPTORQ8TB45 409 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 SH3RF3Q8TEJ3 882 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-211ENST00000484581 POF1BQ8WVV4 589 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 HDAC10Q969S8 669 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 BTBD1Q9H0C5 482 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 MTG2Q9H4K7 406 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 CASS4Q9NQ75 786 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 JADE2Q9NQC1 790 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 LUZP4Q9P127 313 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 FNIP2Q9P278 1114 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 ARHGAP28Q9P2N2 729 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 SCOCQ9UIL1 159 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 PCDHB6Q9Y5E3 794 aa5.56□□□□□ -1.52
VPS13A-211ENST00000484581 SLC16A6O15403 523 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 OPHN1O60890 802 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 NBNO60934 754 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 PCDH8O95206 1070 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 ZNF28P17035 718 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 MCAMP43121 646 aa5.55□□□□□ -1.52
VPS13A-211ENST00000484581 CCT2P78371 535 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms