RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 A0A1W2PQC6 194 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 A0A1W2PQD8 194 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 A6NCN8 305 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 ISM1B1AKI9 464 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 TCERG1O14776 1098 aaKnown RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 FAHP16930 419 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 FUT4P22083 530 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 EEF1GP26641 437 aaKnown RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 GMPRP36959 345 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 ITGA8P53708 1063 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 SUMO3P55854 103 aaPredicted RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 ZACNQ401N2 412 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 C16orf54Q6UWD8 224 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 CEP128Q6ZU80 1094 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 RPGRQ92834 1020 aaKnown RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 LTV1Q96GA3 475 aaPredicted RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 VRK1Q99986 396 aaPredicted RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 PITHD1Q9GZP4 211 aaPredicted RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 RBM12Q9NTZ6 932 aaKnown RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.54□□□□□ -0.72
TTC3-218ENST00000484047 IFT80Q9P2H3 777 aaPredicted RBP10.54□□□□□ -0.72
TTC3-218ENST00000484047 ABCF2Q9UG63 623 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 KIF27Q86VH2 1401 aa10.54□□□□□ -0.72
TTC3-218ENST00000484047 ABCA5Q8WWZ7 1642 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 ARHGEF15O94989 841 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 GLI4P10075 376 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 JMJD6Q6NYC1 403 aaPredicted RBP10.53□□□□□ -0.72
TTC3-218ENST00000484047 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
TTC3-218ENST00000484047 USP13Q92995 863 aaPredicted RBP10.53□□□□□ -0.72
TTC3-218ENST00000484047 AMNQ9BXJ7 453 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 LRRC4CQ9HCJ2 640 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 ALG13Q9NP73 1137 aaKnown RBP10.53□□□□□ -0.72
TTC3-218ENST00000484047 OBP2BQ9NPH6 170 aa10.53□□□□□ -0.72
TTC3-218ENST00000484047 TYRP14679 529 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 FAM26EQ8N5C1 309 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 CLPTM1LQ96KA5 538 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 MSLNLQ96KJ4 702 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 SEC62Q99442 399 aaKnown RBP10.52□□□□□ -0.72
TTC3-218ENST00000484047 STK33Q9BYT3 514 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 RASSF1Q9NS23 344 aa10.52□□□□□ -0.72
TTC3-218ENST00000484047 LGALS16A8MUM7 142 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 TISP43B9A030 160 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 B9A039 149 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 ACKR2O00590 384 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 IFIT1P09914 478 aaKnown RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 HTRA4P83105 476 aaPredicted RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 CNGB1Q14028 1251 aaPredicted RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 KHDC1Q4VXA5 237 aaKnown RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 MZT2BQ6NZ67 158 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 DCP2Q8IU60 420 aaKnown RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 TTLL11Q8NHH1 800 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 NOL10Q9BSC4 688 aaKnown RBP10.52□□□□□ -0.73
TTC3-218ENST00000484047 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
TTC3-218ENST00000484047 RPLP2P05387 115 aaKnown RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 COL8A1P27658 744 aa10.51□□□□□ -0.73
TTC3-218ENST00000484047 KIR2DL1P43626 348 aaPredicted RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 KIR2DL2P43627 348 aaPredicted RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 ARL4CP56559 192 aa10.51□□□□□ -0.73
TTC3-218ENST00000484047 RFX8Q6ZV50 586 aa10.51□□□□□ -0.73
TTC3-218ENST00000484047 ZSCAN31Q96LW9 406 aaPredicted RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 PNPOQ9NVS9 261 aa10.51□□□□□ -0.73
TTC3-218ENST00000484047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 COL20A1Q9P218 1284 aa10.51□□□□□ -0.73
TTC3-218ENST00000484047 TDRD9Q8NDG6 1382 aaKnown RBP10.51□□□□□ -0.73
TTC3-218ENST00000484047 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
TTC3-218ENST00000484047 NPC1O15118 1278 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 CKMT1AP12532 417 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 SYN1P17600 705 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 TAF12Q16514 161 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 C3orf38Q5JPI3 329 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 TXLNBQ8N3L3 684 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 ATP11CQ8NB49 1132 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 NUP43Q8NFH3 380 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 FTSJ1Q9UET6 329 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 WASF3Q9UPY6 502 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
TTC3-218ENST00000484047 GOLGA6L3A6NEY3 463 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 SGTAO43765 313 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 EFEMP2O95967 443 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 PRKCAP17252 672 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 FGFR2P21802 821 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 PTGS1P23219 599 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 SLC6A9P48067 706 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 GPR15P49685 360 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 TARDBPQ13148 414 aaKnown RBP eCLIP10.5□□□□□ -0.73
TTC3-218ENST00000484047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.5□□□□□ -0.73
TTC3-218ENST00000484047 ASB12Q8WXK4 309 aa10.5□□□□□ -0.73
TTC3-218ENST00000484047 HOXB13Q92826 284 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms