RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SLC38A7Q9NVC3 462 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 CNTN3Q9P232 1028 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TBX20Q9UMR3 447 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 TRAF3IP3Q9Y228 551 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 PIN4Q9Y237 131 aaKnown RBP5.58□□□□□ -1.52
HDAC6-223ENST00000480525 C2CD2Q9Y426 696 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 PCDHB2Q9Y5E7 798 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 MYO7AQ13402 2215 aa5.58□□□□□ -1.52
HDAC6-223ENST00000480525 VWA8A3KMH1 1905 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 LINC01553A4QN01 128 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 ZBBXA8MT70 800 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 H3BNC9 293 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 K7ENM7 598 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 PDXKO00764 312 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 HNRNPDLO14979 420 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 OGTO15294 1046 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 CLDN3O15551 220 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 XPOTO43592 962 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 KLRC4O43908 158 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 SMC2O95347 1197 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 MBD3O95983 291 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 KRT18P05783 430 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 CLTAP09496 248 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 RPL9P32969 192 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 BMPR1AP36894 532 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 NDUFA8P51970 172 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 CREMQ03060 361 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 TAP1Q03518 808 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 TMEM62Q0P6H9 643 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 COASYQ13057 564 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 SURF1Q15526 300 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 EDRF1Q3B7T1 1238 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 FAM26FQ5R3K3 315 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 PDXDC1Q6P996 788 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 KSR1Q8IVT5 923 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 ABI1Q8IZP0 508 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 MYOCDQ8IZQ8 938 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 GUF1Q8N442 669 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 FIBCD1Q8N539 461 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 MYCT1Q8N699 235 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 GSTCDQ8NEC7 633 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 URGCPQ8TCY9 931 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 DHX58Q96C10 678 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 ZBTB10Q96DT7 871 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 PAGE5Q96GU1 130 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 CASD1Q96PB1 797 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 ACCSQ96QU6 501 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 YME1L1Q96TA2 773 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 CDCA3Q99618 268 aaPredicted RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 SH2D3AQ9BRG2 576 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 MKNK1Q9BUB5 465 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 RHOBTB2Q9BYZ6 727 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 OSBPL7Q9BZF2 842 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 TRIM6Q9C030 488 aaPredicted RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 GBP3Q9H0R5 595 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF576Q9H609 170 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 MRPL44Q9H9J2 332 aaKnown RBP5.57□□□□□ -1.52
HDAC6-223ENST00000480525 PANK4Q9NVE7 773 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 LRFN2Q9ULH4 789 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 SSX2IPQ9Y2D8 614 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 IPPQ9Y573 584 aa5.57□□□□□ -1.52
HDAC6-223ENST00000480525 A0A1B0GVL5 298 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TTC26A0AVF1 554 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ARHGEF37A1IGU5 675 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ARL5CA6NH57 179 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CCDC169A6NNP5 214 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PMM2O15305 246 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SLC16A4O15374 487 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 KINO60870 393 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 NR1I2O75469 434 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 OFD1O75665 1012 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 IL18RAPO95256 599 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SSBP05455 408 aaKnown RBP eCLIP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CA3P07451 260 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 FAM163BP0C2L3 166 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ITGA4P13612 1032 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 LRPAP1P30533 357 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 AP3M2P53677 418 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CLDN10P78369 228 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 LRRC63Q05C16 580 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ELAVL2Q12926 359 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TUSC3Q13454 348 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 BTG3Q14201 252 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 NAB2Q15742 525 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ZBTB6Q15916 424 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PTPROQ16827 1216 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF568Q3ZCX4 644 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 LONRF3Q496Y0 759 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TIGD5Q53EQ6 642 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 HERC4Q5GLZ8 1057 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 NOMO2Q5JPE7 1267 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CLLU1OSQ5K130 101 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PPP2R2DQ66LE6 453 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 AGMOQ6ZNB7 445 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 RBM43Q6ZSC3 357 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 HS2ST1Q7LGA3 356 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms