RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 KRT71Q3SY84 523 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 RSBN1LQ6PCB5 846 aaPredicted RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 ANKRD27Q96NW4 1050 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 FIZ1Q96SL8 496 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 ZNF577Q9BSK1 485 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PDGFDQ9GZP0 370 aaPredicted RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 RANBP17Q9H2T7 1088 aaKnown RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 ZNF277Q9NRM2 450 aaPredicted RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 COL4A5P29400 1685 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 SLC16A3O15427 465 aaKnown RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 GFPT2O94808 682 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 CNGA1P29973 690 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 MSH2P43246 934 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 CYP2J2P51589 502 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 CEP55Q53EZ4 464 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 NCAPG2Q86XI2 1143 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 FAM186BQ8IYM0 893 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
CCNL1-216ENST00000475298 FAM151AQ8WW52 585 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PARVGQ9HBI0 331 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 GGT7Q9UJ14 662 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 STK24Q9Y6E0 443 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 KIF13BQ9NQT8 1826 aa13.97□□□□□ -0.17
CCNL1-216ENST00000475298 ABLIM1O14639 778 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 COL2A1P02458 1487 aaPredicted RBP13.96□□□□□ -0.17
CCNL1-216ENST00000475298 SHBGP04278 402 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 GAP43P17677 238 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 ALDH3A1P30838 453 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 JAM2P57087 298 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 LBRQ14739 615 aaKnown RBP13.96□□□□□ -0.17
CCNL1-216ENST00000475298 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 ALKBH5Q6P6C2 394 aaKnown RBP13.96□□□□□ -0.17
CCNL1-216ENST00000475298 TMC3Q7Z5M5 1100 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 AGBL1Q96MI9 1066 aa13.96□□□□□ -0.17
CCNL1-216ENST00000475298 METTL14Q9HCE5 456 aaKnown RBP13.96□□□□□ -0.17
CCNL1-216ENST00000475298 NKX1-2Q9UD57 310 aaPredicted RBP13.96□□□□□ -0.17
CCNL1-216ENST00000475298 F8VZ95 297 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 VIL1P09327 827 aaKnown RBP13.96□□□□□ -0.18
CCNL1-216ENST00000475298 TNNC1P63316 161 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 BNIP1Q12981 228 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 DGKZQ13574 1117 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 ASRGL1Q7L266 308 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 PBKQ96KB5 322 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 LXNQ9BS40 222 aa13.96□□□□□ -0.18
CCNL1-216ENST00000475298 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.18
CCNL1-216ENST00000475298 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 KCNK3O14649 394 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 OAS1P00973 400 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 VIMP08670 466 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 ZNF131P52739 623 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 MRPS35P82673 323 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 MTMR3Q13615 1198 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CBWD6Q4V339 395 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CBWD3Q5JTY5 395 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CBWD5Q5RIA9 395 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 ODR4Q5SWX8 454 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 HHATQ5VTY9 493 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 FAM178BQ8IXR5 827 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 RDH13Q8NBN7 331 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 KLHL29Q96CT2 875 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 COL20A1Q9P218 1284 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 TISP43B9A030 160 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 IPO5O00410 1097 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 DDX3XO00571 662 aaKnown RBP eCLIP13.95□□□□□ -0.183e-13■□□□□ 10.2
CCNL1-216ENST00000475298 EIF3DO15371 548 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 IMPDH2P12268 514 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 RXRBP28702 533 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 PSMC2P35998 433 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 MMP13P45452 471 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 COPS2P61201 443 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CUL3Q13618 768 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 CCDC38Q502W7 563 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 ZNF720Q7Z2F6 126 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 TRMT1LQ7Z2T5 733 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 APLFQ8IW19 511 aaPredicted RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 LARGE2Q8N3Y3 721 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 IL31RAQ8NI17 732 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 GMLQ99445 158 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 TRIM33Q9UPN9 1127 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
CCNL1-216ENST00000475298 MYH11P35749 1972 aa13.95□□□□□ -0.18
CCNL1-216ENST00000475298 ZSCAN9O15535 394 aaPredicted RBP13.94□□□□□ -0.18
CCNL1-216ENST00000475298 ITGB5P18084 799 aa13.94□□□□□ -0.18
CCNL1-216ENST00000475298 PRKCIP41743 596 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms