RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 O00370 1275 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 NEK3P51956 506 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MARSP56192 900 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 ITPK1Q13572 414 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 PRKG1Q13976 671 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 ZRSR2Q15696 482 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 C10orf76Q5T2E6 689 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 NSMFQ6X4W1 530 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MAPKAPK5Q8IW41 473 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TEX9Q8N6V9 391 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 SLC30A5Q8TAD4 765 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 ZNF333Q96JL9 665 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 LRRC37BQ96QE4 947 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CTTNBP2NLQ9P2B4 639 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 RASAL2Q9UJF2 1139 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CTDP1Q9Y5B0 961 aaPredicted RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 NVLO15381 856 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 SERPINB2P05120 415 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 KCNA3P22001 575 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 STAT1P42224 750 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 DHX34Q14147 1143 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 SNX30Q5VWJ9 437 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 MFSD5Q6N075 450 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RPUSD2Q8IZ73 545 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 TTC7AQ9ULT0 858 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 NAALADL1Q9UQQ1 740 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 WASF2Q9Y6W5 498 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 H0YIN7 160 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 MED24O75448 989 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CYP1A1P04798 512 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 COMTP21964 271 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 GNA11P29992 359 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 OVGP1Q12889 678 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 TMED2Q15363 201 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 TAF1BQ53T94 588 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 C12orf60Q5U649 245 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CYP4F22Q6NT55 531 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 ARHGAP22Q7Z5H3 698 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 VPS36Q86VN1 386 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.5□□□□□ -1.05
TPM3-215ENST00000469717 EXOC8Q8IYI6 725 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 C4orf33Q8N1A6 199 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 SCG3Q8WXD2 468 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 ART4Q93070 314 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RBM41Q96IZ5 413 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 FGD4Q96M96 766 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RAB3IPQ96QF0 476 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 HERPUD2Q9BSE4 406 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 SEC63Q9UGP8 760 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 ASIC3Q9UHC3 531 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 DCTN4Q9UJW0 460 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 DNAJC12Q9UKB3 198 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 LRP5O75197 1615 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 WDR91A4D1P6 747 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 C2orf71A6NGG8 1288 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 SIGLEC16A6NMB1 481 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CLDN3O15551 220 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 COILP38432 576 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 POLGP54098 1239 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 CACNA2D1P54289 1103 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CCDC6Q16204 474 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CBWD6Q4V339 395 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CBWD3Q5JTY5 395 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CBWD5Q5RIA9 395 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 RNF43Q68DV7 783 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 ISLR2Q6UXK2 745 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 DNAJC14Q6Y2X3 702 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 ARHGAP27Q6ZUM4 889 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 PHLDB2Q86SQ0 1253 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CCDC65Q8IXS2 484 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 ZNF444Q8N0Y2 327 aaPredicted RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 WDR60Q8WVS4 1066 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 CELF1Q92879 486 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 RUSC1Q9BVN2 902 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 PCDHA12Q9UN75 941 aa8.5□□□□□ -1.05
TPM3-215ENST00000469717 BZW2Q9Y6E2 419 aaKnown RBP8.5□□□□□ -1.05
TPM3-215ENST00000469717 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.49□□□□□ -1.05
TPM3-215ENST00000469717 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 A0A0A6YYK5 440 aaPredicted RBP8.49□□□□□ -1.05
TPM3-215ENST00000469717 CNGA1P29973 690 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 GNAQP50148 359 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 KRT17Q04695 432 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 KPNB1Q14974 876 aaKnown RBP8.49□□□□□ -1.05
TPM3-215ENST00000469717 PLEKHG4Q58EX7 1191 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 GALNT17Q6IS24 598 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 BTNL9Q6UXG8 535 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 TRIM74Q86UV6 250 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 TRIM73Q86UV7 250 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
TPM3-215ENST00000469717 LRRC8CQ8TDW0 803 aa8.49□□□□□ -1.05
TPM3-215ENST00000469717 GPR88Q9GZN0 384 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms