RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DENND3A2RUS2 1198 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 ADM5C9JUS6 153 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 BLMHQ13867 455 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 RPS6KA1Q15418 735 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 MRRFQ96E11 262 aaKnown RBP13.23□□□□□ -0.29
USP11-206ENST00000469080 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 FAM118BQ9BPY3 351 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
USP11-206ENST00000469080 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 A6NNZ2 444 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 EIF4BP23588 611 aaKnown RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 TUBB8Q3ZCM7 444 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CCDC170Q8IYT3 715 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 MKL1Q969V6 931 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 NR3C2P08235 984 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 PCK1P35558 622 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 PPP1R2P41236 205 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 ANKRD20A8PQ5CZ79 823 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 HAUS6Q7Z4H7 955 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CCDC63Q8NA47 563 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 FNBP1Q96RU3 617 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 MXRA8Q9BRK3 442 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 TRIM7Q9C029 511 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 DDX47Q9H0S4 455 aaKnown RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 PREBQ9HCU5 417 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 OSGEPQ9NPF4 335 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 SPATA7Q9P0W8 599 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 PTPN22Q9Y2R2 807 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 PPP1R37O75864 691 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CD58P19256 250 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
USP11-206ENST00000469080 LENG9Q96B70 501 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 DNAJC7Q99615 494 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 NFU1Q9UMS0 254 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 PLAGL2Q9UPG8 496 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
USP11-206ENST00000469080 LUC7L3O95232 432 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 KRT19P08727 400 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 CKAP4Q07065 602 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 PTGISQ16647 500 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 DHX38Q92620 1227 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 BZW2Q9Y6E2 419 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 NOP56O00567 594 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 TUBB2AQ13885 445 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 SLMAPQ14BN4 828 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 OLFML1Q6UWY5 402 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 AGAP11Q8TF27 550 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 SPIRE2Q8WWL2 714 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 TUBB2BQ9BVA1 445 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
USP11-206ENST00000469080 CSADQ9Y600 493 aa13.21□□□□□ -0.29
USP11-206ENST00000469080 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 RGL2O15211 777 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 SPOPO43791 374 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 MGRN1O60291 552 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 SERPING1P05155 500 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 TRADDQ15628 312 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 GJC2Q5T442 439 aaPredicted RBP13.21□□□□□ -0.3
USP11-206ENST00000469080 ZNF571Q7Z3V5 609 aaPredicted RBP13.21□□□□□ -0.3
USP11-206ENST00000469080 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 MAIP1Q8WWC4 291 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.3
USP11-206ENST00000469080 PCMTD2Q9NV79 361 aa13.21□□□□□ -0.3
USP11-206ENST00000469080 ZC3H4Q9UPT8 1303 aaKnown RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 LRP5O75197 1615 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 NFKBIEO00221 500 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 HGSO14964 777 aaPredicted RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 TLR2O60603 784 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 PON1P27169 355 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 ITGB3BPQ13352 177 aaPredicted RBP13.2□□□□□ -0.3
USP11-206ENST00000469080 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
USP11-206ENST00000469080 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms