RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 USP38Q8NB14 1042 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 SAAL1Q96ER3 474 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 MSTO1Q9BUK6 570 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 CDT1Q9H211 546 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 TMEM39AQ9NV64 488 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 ST3GAL5Q9UNP4 418 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 MICAL3Q7RTP6 2002 aa12.94□□□□□ -0.34
RNF13-208ENST00000467996 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 GOLGA6L3A6NEY3 463 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 KIAA0391O15091 583 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 SLC16A3O15427 465 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 FAM189A1O60320 539 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 EXOC3O60645 756 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 NBNO60934 754 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 AKAP3O75969 853 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 CYP2C18P33260 490 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 CASP4P49662 377 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 CCL23P55773 120 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 NFX1Q12986 1120 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 GPNMBQ14956 572 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 FILIP1Q7Z7B0 1213 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 GPD1LQ8N335 351 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 XXYLT1Q8NBI6 393 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 SCLYQ96I15 445 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 ADPGKQ9BRR6 497 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 AGO2Q9UKV8 859 aaKnown RBP12.93□□□□□ -0.34
RNF13-208ENST00000467996 PADI3Q9ULW8 664 aa12.93□□□□□ -0.34
RNF13-208ENST00000467996 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 KCNJ18B7U540 433 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 OGTO15294 1046 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 NPTXRO95502 500 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 GNA14O95837 355 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 MCF2P10911 925 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
RNF13-208ENST00000467996 ATP1A3P13637 1013 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 KCNJ12Q14500 433 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 DCAF4L1Q3SXM0 396 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 ZBTB41Q5SVQ8 909 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 FAM186BQ8IYM0 893 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
RNF13-208ENST00000467996 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 FBXL18Q96ME1 805 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 MKNK1Q9BUB5 465 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 EIF2AQ9BY44 585 aaKnown RBP12.92□□□□□ -0.34
RNF13-208ENST00000467996 IFIH1Q9BYX4 1025 aaKnown RBP12.92□□□□□ -0.34
RNF13-208ENST00000467996 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 MAGEC2Q9UBF1 373 aaPredicted RBP12.92□□□□□ -0.34
RNF13-208ENST00000467996 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 TET1Q8NFU7 2136 aa12.92□□□□□ -0.34
RNF13-208ENST00000467996 EXTL3O43909 919 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 MGEA5O60502 916 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 LDHAP00338 332 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 ADRB2P07550 413 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 TNFSF9P41273 254 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 ACOT2P49753 483 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 SPAG1Q07617 926 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 DSC3Q14574 896 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 UVSSAQ2YD98 709 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 SEZ6Q53EL9 994 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 TCP11X2Q5H9J9 407 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 CRELD2Q6UXH1 353 aaPredicted RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
RNF13-208ENST00000467996 CBWD2Q8IUF1 395 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 CEP120Q8N960 986 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 RDH13Q8NBN7 331 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 GRPEL1Q9HAV7 217 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 CHST12Q9NRB3 414 aa12.91□□□□□ -0.34
RNF13-208ENST00000467996 MAPK13O15264 365 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 TIMP1P01033 207 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 CXCL10P02778 98 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 CDK11BP21127 795 aaKnown RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 ITGB8P26012 769 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 GRM5P41594 1212 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 MTIF2P46199 727 aaKnown RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 HSP90AA2PQ14568 343 aaPredicted RBP12.9□□□□□ -0.34
RNF13-208ENST00000467996 KRT31Q15323 416 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 PLEKHG4Q58EX7 1191 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 FRMD5Q7Z6J6 570 aa12.9□□□□□ -0.34
RNF13-208ENST00000467996 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms