RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 TAP1Q03518 808 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 BBS9Q3SYG4 887 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 PCNX4Q63HM2 1172 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 KSR1Q8IVT5 923 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 CERS5Q8N5B7 392 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 SYTL5Q8TDW5 730 aaPredicted RBP14.71□□□□□ -0.05
BRAT1-203ENST00000467558 PARVAQ9NVD7 372 aa14.71□□□□□ -0.05
BRAT1-203ENST00000467558 RSPH10B2B2RC85 870 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 RSPH10BP0C881 870 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 SGSM1Q2NKQ1 1148 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 C6orf118Q5T5N4 469 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 RNF25Q96BH1 459 aaPredicted RBP14.71□□□□□ -0.06
BRAT1-203ENST00000467558 ZNF560Q96MR9 790 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.06
BRAT1-203ENST00000467558 NOC2LQ9Y3T9 749 aaKnown RBP14.71□□□□□ -0.06
BRAT1-203ENST00000467558 LTN1O94822 1766 aa14.71□□□□□ -0.06
BRAT1-203ENST00000467558 EXOC1LA0A1B0GW35 172 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 ADCY2Q08462 1091 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 THEM5Q8N1Q8 247 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 TBX20Q9UMR3 447 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 CALRP27797 417 aaKnown RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 SLCO1A2P46721 670 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 KLK7P49862 253 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 CAV1Q03135 178 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 CYP26B1Q9NR63 512 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 NOVA2Q9UNW9 492 aaKnown RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 TARSL2A2RTX5 802 aaKnown RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 FAM187AA6NFU0 413 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 PFDN6O15212 129 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 NR1D1P20393 614 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 LAMC2Q13753 1193 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 SDCCAG8Q86SQ7 713 aaPredicted RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 PYROXD1Q8WU10 500 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 PRMT7Q9NVM4 692 aaPredicted RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 IPO11Q9UI26 975 aaKnown RBP14.7□□□□□ -0.06
BRAT1-203ENST00000467558 PCDHB2Q9Y5E7 798 aa14.7□□□□□ -0.06
BRAT1-203ENST00000467558 A8MXQ7 604 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 RNPC3Q96LT9 517 aaKnown RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 SEMA6BQ9H3T3 888 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 INPP5FQ9Y2H2 1132 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 EXTL3O43909 919 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 SLC1A1P43005 524 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 ARPP19P56211 112 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 TTC19Q6DKK2 380 aaPredicted RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 TARS2Q9BW92 718 aaKnown RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 DISP2A7MBM2 1401 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 TYW5A2RUC4 315 aaKnown RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 RBP5P82980 135 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 NYAP1Q6ZVC0 841 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 CCDC68Q9H2F9 335 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 TAF1DQ9H5J8 278 aaPredicted RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 STAP1Q9ULZ2 295 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 FAM237AA0A1B0GTK4 181 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 VIL1P09327 827 aaKnown RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 SLC35G2Q8TBE7 412 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 ARHGEF2Q92974 986 aaKnown RBP14.69□□□□□ -0.06
BRAT1-203ENST00000467558 DNAJC7Q99615 494 aa14.69□□□□□ -0.06
BRAT1-203ENST00000467558 SUN1O94901 812 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 FGRP09769 529 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 TCF7P36402 384 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 CCT5P48643 541 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 ZNF157P51786 506 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 C4orf19Q8IY42 314 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 KATNAL1Q9BW62 490 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 EPC1Q9H2F5 836 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 PXMP2Q9NR77 195 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 OLFML3Q9NRN5 406 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 DDX56Q9NY93 547 aaKnown RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 DONSONQ9NYP3 566 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 CPSF3Q9UKF6 684 aaKnown RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 AGAP1Q9UPQ3 857 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 ACSL3O95573 720 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 HLA-DRAP01903 254 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 TMED2Q15363 201 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 FAM102AQ5T9C2 384 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 TRIM59Q8IWR1 403 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 GSDMBQ8TAX9 411 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 SCFD1Q8WVM8 642 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 MROH8Q9H579 483 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 TRIM10Q9UDY6 481 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 PCSK1NQ9UHG2 260 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 PLAAQ9Y263 795 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 ESYT3A0FGR9 886 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 DHX34Q14147 1143 aaKnown RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 ATF7IP2Q5U623 682 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 EFCAB12Q6NXP0 572 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 TNIP3Q96KP6 325 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 KLC2Q9H0B6 622 aa14.68□□□□□ -0.06
BRAT1-203ENST00000467558 PIN4Q9Y237 131 aaKnown RBP14.68□□□□□ -0.06
BRAT1-203ENST00000467558 MT-ND3P03897 115 aa14.67□□□□□ -0.06
BRAT1-203ENST00000467558 GUCY2CP25092 1073 aa14.67□□□□□ -0.06
BRAT1-203ENST00000467558 TSPY1Q01534 308 aa14.67□□□□□ -0.06
BRAT1-203ENST00000467558 CCDC137Q6PK04 289 aaKnown RBP14.67□□□□□ -0.06
BRAT1-203ENST00000467558 ZNF720Q7Z2F6 126 aa14.67□□□□□ -0.06
BRAT1-203ENST00000467558 C18orf8Q96DM3 657 aa14.67□□□□□ -0.06
BRAT1-203ENST00000467558 TBK1Q9UHD2 729 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms