RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PNMA3Q9UL41 463 aa13.95□□□□□ -0.18
PDZRN3-205ENST00000466780 EMSYQ7Z589 1322 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 A8MUI8 341 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 ADRA2BP18089 450 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 CHKAP35790 457 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 LLGL1Q15334 1064 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 ODR4Q5SWX8 454 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 APOBEC3HQ6NTF7 200 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 MIGA2Q7L4E1 593 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 C12orf50Q8NA57 414 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 ACP6Q9NPH0 428 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 SEL1LQ9UBV2 794 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 TISP43B9A030 160 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 PSMD10O75832 226 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 SGPL1O95470 568 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 KRT16P08779 473 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 COPS2P61201 443 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 NUGGCQ68CJ6 796 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 RHBDF2Q6PJF5 856 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 SLC9A9Q8IVB4 645 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 SERPINB12Q96P63 405 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 STRA6Q9BX79 667 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 NOCTQ9UK39 431 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 MTUS1Q9ULD2 1270 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 SIPA1L1O43166 1804 aa13.94□□□□□ -0.18
PDZRN3-205ENST00000466780 F5H6K3 240 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SUN1O94901 812 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 GJB6O95452 261 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 GH1P01241 217 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SLC8A3P57103 927 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 NOP9Q86U38 636 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 FITM2Q8N6M3 262 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 RSRC1Q96IZ7 334 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SUGT1Q9Y2Z0 365 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 QSER1Q2KHR3 1735 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 ECEL1O95672 775 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 DLATP10515 647 aaKnown RBP13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 CACNB3P54284 484 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 CALCOCO2Q13137 446 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 CGB2Q6NT52 195 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 EPS8L1Q8TE68 723 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 CKAP2Q8WWK9 683 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 KLHL29Q96CT2 875 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 PCIF1Q9H4Z3 704 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 LRRC19Q9H756 370 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 ARHGEF3Q9NR81 526 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 PRKAG3Q9UGI9 489 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 TRIM33Q9UPN9 1127 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 LTBP1Q14766 1721 aa13.93□□□□□ -0.18
PDZRN3-205ENST00000466780 SPOPO43791 374 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 NDUFB10O96000 172 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 GCLMP48507 274 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 KRT17Q04695 432 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 CERKLQ49MI3 558 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 SEPT12Q8IYM1 358 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 DAW1Q8N136 415 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ANKLE1Q8NAG6 615 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 GDAP1Q8TB36 358 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ZNF564Q8TBZ8 553 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 RMDN2Q96LZ7 410 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ZNF570Q96NI8 536 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 NUP85Q9BW27 656 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ARL2BPQ9Y2Y0 163 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 RBBP6Q7Z6E9 1792 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 CLDN3O15551 220 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PPP2R5CQ13362 524 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ZKSCAN8Q15776 578 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 DOK7Q18PE1 504 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 STXBP4Q6ZWJ1 553 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ASRGL1Q7L266 308 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 DHX37Q8IY37 1157 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ZSWIM2Q8NEG5 633 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 KCNK9Q9NPC2 374 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 DNAJC17Q9NVM6 304 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 WHRNQ9P202 907 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 MYH11P35749 1972 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 DDTLA6NHG4 134 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 PPEF1O14829 653 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 IVDP26440 423 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 ICA1Q05084 483 aa13.92□□□□□ -0.18
PDZRN3-205ENST00000466780 MGAT5Q09328 741 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms